KEGG   Coniophora puteana: CONPUDRAFT_162325
Entry
CONPUDRAFT_162325 CDS       T03134                                 
Name
(RefSeq) pre-mRNA-splicing ATP-dependent RNA helicase PRP28
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Organism
cput  Coniophora puteana
Pathway
cput03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CONPUDRAFT_162325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cput03041]
    CONPUDRAFT_162325
Spliceosome [BR:cput03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    CONPUDRAFT_162325
 Complex C
   U5 SnRNP specific factors
    CONPUDRAFT_162325
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA
Other DBs
NCBI-GeneID: 19204717
NCBI-ProteinID: XP_007764653
JGI: Conpu1_162325
UniProt: A0A5M3N268
Position
Unknown
AA seq 773 aa
MAARSEPLSIESLLQKQKQDKEAAAKPKFLSKEERAKIAIAKRAQEIKDQRERDEHARQD
RAALEREADSIRSQERTHTQARYPASTRNYDDNRDPHPRSDRGRDRHGRRDRGRDADRER
DRRDAASKPAYDNVPTGPRADRGKPPPPGPASSSMPPPPLPAHLTAATTEPSFTPSMTDD
EISAIRSRYLGADRKKRKIRKMNDRKFVFDWDETDDTFAADSPAAAGSARQGAQVMFGRG
RIAGMDDGGATAPVAVPGAPAAGTPLNANLADPLERRRALKAGLDERHWSDKPLDEMKER
DWRIFREDFSIAARGGSIPHPLRSWAESEIPEIILGVIEQVGYKEPSPIQRQAIPIGLQN
RDVIGIAETGSGKTAAFVIPMLTFISTMPAFTDDNRHLGPYALILAPTRELAQQIEAEAR
KFATPLGFTCVSIVGGRAVEEQQFNLREGAEIIIATPGRLKDVLERHVLVLSQCRYIVMD
EADRMVHLGFEADLLFILDKLPSDVLQGEEPGAAAMMDVDGAETAAAVRKGRTRVTTLFS
ATMPPAVERLARKYLRKPAVITIGEAGRAVDTVDQRVEFVNGDEKKRLRMLEILETGGYA
SPIIVFVNQKKTADMVAKDLSRGGWSTSTLHSGKNQEQREAALQALRTGEADILVATDLA
GRGIDVQDVSLVINYQMAGTIEAYVHRIGRTGRAGKQGTAITFLTNDDDEVMYDLKQDVP
QIADERGFILRVGAAEISKSPVSKVSAELARHESAQHKVSREMKRKRDADDQG
NT seq 2322 nt   +upstreamnt  +downstreamnt
atggccgcacgctcagaaccactctccatagagtccctcctccagaaacagaagcaggac
aaggaggctgctgcaaagcccaagttcctgtcaaaggaggagcgcgccaagattgccatt
gccaaacgtgcccaggaaatcaaggaccagcgtgaacgcgacgaacacgcccgccaggac
cgcgctgctctcgagcgagaggctgactccatccgctcccaggaacgcacacacacacag
gctcgctatcccgcatccaccagaaactatgatgacaatagagacccgcatccccgctca
gacagaggcagagaccgccatggccgccgtgacagaggcagagatgcagacagagagcgc
gacaggcgggacgccgcctcaaaacccgcctacgacaacgtccccaccggccctcgcgca
gaccgcggaaaaccacctccccccggccccgcatcctcctccatgcctccccctcccctc
cccgcccacctcaccgccgccaccacagaaccttccttcacaccctccatgaccgacgac
gaaatatccgccatccgctcccgctacctcggcgccgaccgcaaaaagcgcaagatccgc
aagatgaacgaccgcaagttcgtcttcgactgggacgagacagacgacacctttgccgcc
gactcccccgcagcagcaggcagcgcccgtcagggcgcccaggtcatgtttggccgcggc
cgcatcgccggcatggacgacggcggtgctacagcccccgtcgctgttcccggcgcaccc
gctgccggtactccgctcaatgcgaacctcgcagacccgctcgagcgacgcagggcgctg
aaggcgggcctggacgagcgccattggagcgacaagccgctcgacgagatgaaggagcgc
gactggcgcattttcagagaggatttcagtattgctgccagaggtggatctattccgcac
ccgcttcgctcgtgggcagagtcggaaataccagagatcattctcggtgtcatcgaacaa
gtcggctacaaggaaccatcgcccattcagcgtcaggctattcctatcggtttgcaaaat
cgcgatgttattggtattgcagagacaggttccggaaagacggccgcctttgtcatcccc
atgctcacttttatctcgaccatgcccgcatttacggacgacaacagacacttgggcccg
tacgcgctcatcctcgccccgacgcgtgagctggcccagcagatcgaagcagaggcgcgc
aagtttgccacgccgctcgggttcacctgcgtgtcgatcgtcggtggtcgcgccgtcgaa
gagcagcagttcaacctgcgcgaaggcgccgagatcatcatcgccacaccaggccggctc
aaagacgtgctcgagcgacacgtgctcgtgctctcgcagtgccgctacatcgtcatggac
gaggcggaccggatggtgcacctcgggttcgaggccgacctgttgtttatcctcgacaag
ctcccgagcgacgtgctgcagggcgaggagcccggtgcggctgcgatgatggacgtggac
ggcgcggagacggccgcggcggtgcgcaagggccgcacgcgcgtgacgacgctgttttcg
gcgacgatgccgccggcggtggagaggcttgcgaggaagtatttgaggaagccggcggtg
attacgattggcgaggctgggcgcgcggtcgataccgtcgaccagcgggtcgagtttgtc
aatggagacgagaagaagaggctgcggatgctggagatcctcgagaccggcgggtacgcg
tcgcccatcatcgtgtttgtcaaccagaagaagacggcagacatggtcgccaaagacctg
tctcgcgggggctggagcacgtcgacgctgcactcgggcaagaaccaggagcagcgcgag
gctgcgctgcaggcgctgcggacgggcgaggccgatatcctcgtcgccacggatctcgct
gggcgcggtatcgatgtgcaggacgtcagtctggtcatcaactaccagatggcgggcacc
atcgaggcgtacgtccatcgtatcggtcgtaccgggcgtgctggtaagcagggaacggcg
attacgttccttacgaacgacgacgatgaggtcatgtacgatctcaagcaagatgtcccg
cagatagctgacgaacgtggcttcattttgcgcgttggcgctgcagaaatatccaagagc
cccgtgtcaaaggtctcggctgagctcgcgcggcacgagtcggcgcagcacaaggtgtcg
cgcgagatgaagcggaagcgggatgccgatgaccagggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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