KEGG   Cryptosporidium parvum: cgd1_2260
Entry
cgd1_2260         CDS       T00168                                 
Name
(RefSeq) RNA polymerase II B8 subunit
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
cpv  Cryptosporidium parvum
Pathway
cpv03020  RNA polymerase
cpv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    cgd1_2260
  09124 Replication and repair
   03420 Nucleotide excision repair
    cgd1_2260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpv03021]
    cgd1_2260
   03400 DNA repair and recombination proteins [BR:cpv03400]
    cgd1_2260
Transcription machinery [BR:cpv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     cgd1_2260
  RNA polymerase III system
   RNA polymerase III
     cgd1_2260
  RNA polymerase I system
   RNA polymerase I
     cgd1_2260
DNA repair and recombination proteins [BR:cpv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      cgd1_2260
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 3371673
NCBI-ProteinID: XP_628058
ApiDB_CryptoDB: cgd1_2260
UniProt: Q5CSK9
Position
1:506610..507044
AA seq 144 aa
MSLPSCLFEDRFVINSVDSGKFDRIGRIRGRSVGFDADLILDINNELFPVREKESLYIGL
SSQVSVNPNDIVWDNSGPQTLMDQYDYVMYGKIYRVEEKQSDRRSLYASFGGLLMSLTAD
KNLVGDFSLDMRLYCLVRRSEDII
NT seq 435 nt   +upstreamnt  +downstreamnt
atgtcacttccttcgtgcctttttgaagatagatttgttattaacagcgtagatagcgga
aagtttgatcgaattggaaggatcagaggtagaagtgttggctttgatgcagatttaatt
ttagatataaataatgaactatttcctgttagagaaaaagagagcctatacatcggatta
tcatcccaagtttcagtaaatcctaatgatattgtatgggataactctggacctcaaact
cttatggaccaatatgactatgtaatgtatgggaaaatatatcgtgttgaagaaaagcaa
tcagatagaagaagcctttatgcatcattcggtggtctcctaatgtctctaacagcagac
aaaaacttggtaggcgacttctcactcgacatgaggttgtactgcctagttaggagatct
gaagatatcatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APIDB_CRYPTODB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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