KEGG   Cryptosporidium parvum: cgd6_1410
Entry
cgd6_1410         CDS       T00168                                 
Name
(RefSeq) pre-mRNA splicing factor ATP-dependent RNA helicase
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
cpv  Cryptosporidium parvum
Pathway
cpv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    cgd6_1410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpv03041]
    cgd6_1410
Enzymes [BR:cpv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     cgd6_1410
Spliceosome [BR:cpv03041]
 Complex C
  Other components
   Step II factors
    cgd6_1410
SSDB
Motif
Pfam: OB_NTP_bind HA2_C HA2_N Helicase_C DEAD AAA_22 AAA_19 ABC_tran nSTAND3 AAA ATPase PhoH T2SSE AAA_30
Other DBs
NCBI-GeneID: 3375936
NCBI-ProteinID: XP_001388311
ApiDB_CryptoDB: cgd6_1410
UniProt: A3FPT2
Position
6:333918..337194
AA seq 1005 aa
MEELKHLRILNKVQARIFEEWNTNDRDLAEYLCYIGKESKSLKEFNGKVTSISGDKISHE
VLGDIYSIINDTESKLNKVNSDSLKLQKSDSNNDNLNFAIPNEKAPLSKHALELIRKEDP
HYVDINRKNKGQSETISTGFGMKDTNLKKGFGAISGIKLVDSCNVKSQYSGNKQERVSND
YEKWEIMQLLNSGVISRDEIPYDICDTTGDTIDFQNVEISTEIELRNYEPLFLRGQSIKK
FNFDSSIQVVVNPEGSLNKAAELASNIARERREIRDFQEKTLIDSIPRDMNRPWEDPNPE
AGERTIASALRGIGMNSQTTPEWKRQYLGKSLSFGKKNVTASISEQRKNLPIYPMRDSLV
DAIRNNQVIVVIGETGSGKTTQITQYLYEEGFCKDGGIIGCTQPRRVAATSIARRVAQEM
GCTLGSTVGFAIRFEDITTPETKIKYMTDGMLLREALSDNCLSQYSVIMLDEAHERTITT
DVLFGLLKETCIKRPKFRLIVTSATLEADKFSAYFMNCNIFTIPGRTFPVEILYSKEPVD
DYVEATLVTVLQIHLREPPGDILVFLTGQEEIDNACQTLHERMKRLENMKPPPLIILPVY
SSQPSEIQSLIFEDAPPGCRKCVIATNIAEASLTIDGIFFVVDPGFSKMMVFNSKTGMDS
LTVTPISQASAKQRSGRAGRTGPGKCYRLYTEAAFNTEMLPTTVPEIQRTNLANTVLLLK
ALGVNDLLNFDFMDPPPTTTLLIALETLFELGALDEEGFLTRLGRKMAELPMEPKLSKMV
LSSVDLGCSDEIITITSMLSVQNVFYRPKDKQAQADRKKSKFYHPQGDHLTYLNVYNSWK
KQRYSVPWCYENFLQSRALKGAQDVRKQLINIFDKYKLDIISAENDHDKIRKAICAGFFS
NSCKKDSQEGYRNLVDNQHVYLHPSSTLFNKSPEWILYHELVFTSKEYIRDCCTIKPHWL
VDFAPNLFQFADQDQLSKRKKKEKIQPLYNKYEDPNSWRLSKRRR
NT seq 3018 nt   +upstreamnt  +downstreamnt
atggaggaattaaagcatctcagaatactcaataaggttcaagcaaggatatttgaagaa
tggaatactaatgatagagatcttgctgaatatttatgctatattggcaaagaaagtaaa
tcactcaaagagtttaatgggaaagtaacaagtattagtggtgataaaatatctcacgaa
gttttgggcgatatttattcaataataaatgatactgaatctaaattgaataaagtaaat
agtgattctttaaagcttcaaaaatcggactcgaataacgacaatttaaattttgccatt
ccaaatgagaaagcaccattaagcaaacatgctctggaacttattaggaaggaggatcct
cactatgtagatattaacagaaaaaacaagggccaaagcgagacaatttccacaggattt
ggaatgaaggataccaatttaaaaaaaggattcggtgcaatttcaggaattaaactggta
gatagttgcaatgtaaaatcccaatactcaggtaataagcaagaaagggtatctaatgac
tacgaaaagtgggaaattatgcagcttcttaattcaggagttatttcaagggatgaaatt
ccttatgacatttgcgatacaaccggagatactatcgattttcaaaatgtagaaatatcc
actgagattgagcttagaaattatgagccattgtttctcagagggcaatcaattaaaaag
ttcaattttgactcttcaatacaagtcgtagtaaatccagaagggagtttgaataaggca
gctgagttggcatctaacattgcaagagaacgaagagagattcgagattttcaggaaaag
accttaatagatagtattccaagagatatgaaccggccttgggaagaccccaatccagag
gctggggagagaacgattgcaagcgcgctgcgaggaattgggatgaattctcaaaccaca
ccggaatggaaacgccagtatttaggaaagagtctgagctttggcaaaaagaatgttact
gcctctatatcagaacaaagaaaaaatttacccatttatccaatgagagactcactagtc
gatgcaataagaaataaccaggtaatagttgttataggagaaacaggtagtggtaaaact
actcagattacccaatatctatatgaagaaggattttgcaaagatggtggaataattggt
tgcactcaaccaagaagagttgctgcaacttcaatagctagacgcgttgcgcaggaaatg
ggatgtacattgggctctactgttggatttgcaattcgatttgaagatatcacaacacca
gagacaaaaattaaatatatgacagatggaatgcttcttagagaagctttatcggataac
tgtttatcacaatacagcgttattatgcttgatgaggctcatgagagaacaatcacaaca
gacgtgttgtttggactgttaaaggaaacgtgcattaaacgccccaagttcaggttaatt
gtaacatcggctactcttgaagcagataaattttccgcgtattttatgaattgtaatatt
tttactattcctggaagaacttttccagttgaaatattgtactcaaaagagcctgtggac
gattatgttgaggctacattggttactgtacttcagattcatttgcgcgagcctcctgga
gatattctggtgtttctaactggtcaagaggagatcgataatgcttgccaaactctacat
gaaaggatgaaaaggctggaaaatatgaagcctccgccattgattatattacctgtttac
tcatcccagcctagcgaaattcaatctctaatttttgaagatgctcctcctggatgtagg
aaatgcgtgattgcaacaaacattgcggaggcgtcccttaccattgatgggatttttttt
gtagttgacccagggttttcaaaaatgatggtttttaattcaaaaacaggaatggacagt
ctcacagtcactccaatttcccaagctagcgcaaaacagagatctggtagagctggaaga
actggaccaggaaaatgctatcggttatacactgaagctgctttcaatacagaaatgctt
ccaacaacagttcctgagatacaacgtactaatcttgccaatacagtattacttctaaag
gcactaggggtgaacgatttacttaattttgactttatggatccacctcccactacgaca
cttttaattgctttagaaactttgtttgagcttggggcacttgatgaagaaggcttttta
actagattaggtagaaaaatggcagagctacctatggaaccaaagctgagtaaaatggtt
ctttcttctgttgatttgggttgctccgacgaaataataacaattacttctatgctttct
gtacagaatgttttttataggcccaaggataaacaagctcaggcagacagaaagaagtca
aaattttaccatccgcaaggggatcatttgacatatttaaatgtgtataactcctggaaa
aagcaaagatactcagttccttggtgttatgaaaattttctacaatcgcgagcacttaaa
ggagcgcaagacgttcgtaagcagttaattaatatatttgacaagtataagctagatatc
atctcagcagaaaatgatcacgacaaaataaggaaggcaatttgcgctgggttttttagt
aactcttgtaaaaaagattctcaagaaggttacagaaatttggttgacaatcaacatgtt
tacttgcatccatctagcacactatttaacaaatctcctgaatggatactctaccacgag
cttgtatttacttcaaaagaatacattagagactgctgcactattaagcctcattggctt
gttgattttgctcctaatctatttcaatttgcagaccaggatcagctgtcaaaaaggaaa
aaaaaggaaaagattcaaccactatataacaaatatgaagatccaaactcttggaggtta
tcaaaaagaagaagataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APIDB_CRYPTODB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (64)   

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