KEGG   Cryptosporidium parvum: cgd7_5280
Entry
cgd7_5280         CDS       T00168                                 
Name
(RefSeq) structure-specific recognition protein 1 (SSRP1) (recombination signal sequence recognition protein)
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
cpv  Cryptosporidium parvum
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cpv03000]
    cgd7_5280
   03036 Chromosome and associated proteins [BR:cpv03036]
    cgd7_5280
Transcription factors [BR:cpv03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    cgd7_5280
Chromosome and associated proteins [BR:cpv03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     cgd7_5280
SSDB
Motif
Pfam: PH1_SSRP1-like Rttp106-like_middle POB3_N SSrecog WD40_like COMM_domain DUF515
Other DBs
NCBI-GeneID: 3372099
NCBI-ProteinID: XP_628671
ApiDB_CryptoDB: cgd7_5280
UniProt: Q5CXQ9
Position
7:complement(1214884..1216455)
AA seq 523 aa
MATTAGVLSYGNIRGLGYQDQGIFKASKELFGWKNRRTNATYHYKPEEVMGVEWIQTSCE
DSSCQLRVFIREKKDCIHFTGFKTEDYSVIKSHFETYYGINLETKELNTKGINWGDLTIH
NDTICIGNEGKVMMYVPSININQIAMPSKSELVLEFNEGVNAGEDCDELMEIRLFVPNQE
NSLDGNSLSSAEKLRSDLLKLTGIGSSGSMDKVCRWNDIHLLVPRGRYEIEVLVNCLKLH
GKSFDYTILFQSISRLFLLPRPGTSLVNLVVALETPMRQGNTKYPFVVMQFDTQQDENIE
MPLNLSEKEIQRFTGLSPIMTGKFWDIVTRILKSLTGHSIIVPGDFRSASMYHCIRCSYK
AQDGLLYPLNRSFIFITKPVILIRFDDILNIEFSRMGGNQTRFFELTITIRGGGDYSFTS
IDKAEYNPLIKFLQEKNIRIKNLQESLDSSSRRTTSRSKDQDSSKKESSTKSILEQDLPS
DDEDDEDFENDEESYSSSSGSSDGDEEGGSEDEDEADDDDDDE
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggcgacaaccgctggagtactatcttatggaaatattagagggctgggttaccaggac
caaggaatatttaaagcaagtaaagaactatttgggtggaagaatagaagaacaaatgca
acttatcattataaaccagaggaagttatgggagttgaatggatacaaacaagttgtgag
gatagcagctgtcaattaagagtatttatcagagaaaaaaaggattgcatccactttaca
ggttttaagactgaagattatagtgtaattaagagccattttgagacatattatggaatt
aatttggagactaaggagctgaatacaaaaggaattaattggggagatttaactattcac
aatgataccatatgtataggtaatgaaggcaaagtaatgatgtatgttccgagtattaat
attaatcaaatagcaatgccatctaaatcagagttagttttggagttcaatgaaggagtt
aatgcaggagaagattgtgatgaattaatggagatacgtttattcgtaccaaatcaagaa
aattcccttgatggaaattccttgtcatcagcagaaaaattgagatctgatttattaaag
ctgacaggaataggatctagtggatctatggacaaagtctgtcgttggaatgatattcac
ttattggttccaagaggtagatacgaaattgaagttttggttaactgcttaaaactccat
ggtaaatctttcgattatacaatcttattccaatcaatttccagactatttctactccca
aggcctggtacatccttggttaacctagtagtagcattagaaactccaatgagacaagga
aacacaaaatacccatttgttgtaatgcaatttgatacacaacaagatgagaatattgaa
atgcctttaaatctttcagaaaaagaaattcaaaggttcactgggctatcccctataatg
accggtaaattctgggatatagttactcgtattttaaagtccctaacagggcactcaatc
atagttccaggagatttcagatctgcatctatgtaccactgtattagatgctcatataag
gctcaggatggtctactttatcctcttaatcgtagcttcatttttattacaaaacctgta
atattaattagatttgatgatatcttgaatattgagttttcaagaatgggtggtaatcaa
actagattctttgaattaactattacaattaggggtggaggtgactacagtttcacaagt
attgataaagctgagtataatccactcataaaattcttacaagaaaagaatatcagaatt
aaaaatcttcaggagagtcttgattcttcatctagaagaacaacttctagatcaaaagat
caggattcttctaagaaagaatcatcaaccaagtctattcttgagcaagacctaccaagt
gatgatgaagatgacgaagactttgaaaatgatgaggagtcttattcttcaagtagtggc
agttccgatggagatgaggagggtgggagtgaagatgaagatgaggctgacgatgatgat
gatgacgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (114)   
   KEGG ORTHOLOGY (1)   
   RefGene (109)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APIDB_CRYPTODB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (128)   

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