KEGG   Cryptosporidium parvum: cgd8_5280
Entry
cgd8_5280         CDS       T00168                                 
Name
(RefSeq) Deg1p-like type II pseudouridylate synthase TruA
  KO
K01855  tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
Organism
cpv  Cryptosporidium parvum
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cpv03016]
    cgd8_5280
Enzymes [BR:cpv01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.45  tRNA pseudouridine38/39 synthase
     cgd8_5280
Transfer RNA biogenesis [BR:cpv03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    cgd8_5280
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-GeneID: 3374665
NCBI-ProteinID: XP_627406
ApiDB_CryptoDB: cgd8_5280
UniProt: Q5CV63
Position
8:1305650..1306501
AA seq 283 aa
LIFFQGIAFQKDDKIPTIEGEIYKALLQLRLIKDIDSCDLVRCGRTDRGVHSAGNYISVN
LRTRAKNLEPYNYMEMLNGVLPWDIRVIGYCEVRPDFSARFDCEYRLYKYFFPLNHERTK
ISKFPKIPPEQVPLMNVAAKQFLGTHDYRRFCKMDLKNRKNQTYIRTIYEFDINFVDENR
TFAVATIKGSAFLWHQVRLMMGILFEIGQQKFNPEVITQMLTDVEQKNIAELSFQMATEL
GLVLWDCVFKEYDIQCNTNSLKTFLDESESLKLKASLYSFIGS
NT seq 852 nt   +upstreamnt  +downstreamnt
ctaatttttttccagggaatagcatttcaaaaagacgataaaatacctacaatagaggga
gagatctacaaggcactgcttcagctaagactcattaaagatattgattcatgcgactta
gttcgatgcggaaggacagatagaggagttcactctgctggaaattacatttcagttaac
ttgaggacaagagcgaagaacttggaaccttataattatatggaaatgttgaatggtgtg
ctaccatgggacattagagttattggttactgcgaggttagacctgacttcagtgctcgt
tttgattgtgaatatagactttataaatatttctttcctttaaaccatgaaagaacaaag
atatccaagtttccaaaaatcccaccagagcaagtcccgctaatgaacgttgctgcaaaa
cagttcttaggaacccatgattatagaaggttctgtaagatggacttgaagaatcgaaaa
aatcaaacttatattcgtactatttatgaatttgatatcaattttgtagatgagaacagg
acatttgctgttgcaacaatcaaaggatctgcttttttatggcatcaagtcaggctaatg
atgggtattctttttgaaattggacaacagaaatttaacccagaagttattacacaaatg
ttaacagatgtggagcagaagaacattgcagaactttctttccaaatggccactgaactt
ggtttggtactatgggactgtgtgtttaaagaatatgatatccaatgcaatacaaattca
ttgaaaacatttctagatgaatcagagtctttaaaactcaaagcatcactatacagtttt
attgggtcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APIDB_CRYPTODB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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