KEGG T01879: CpPAT10

Corynebacterium pseudotuberculosis PAT10: CpPAT10_0006

Entry

CpPAT10_0006      CDS       T01879

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

cpz Corynebacterium pseudotuberculosis PAT10

Brite

KEGG Orthology (KO) [BR:cpz00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpz03032]
    CpPAT10_0006 (gyrB)
   03400 DNA repair and recombination proteins [BR:cpz03400]
    CpPAT10_0006 (gyrB)
Enzymes [BR:cpz01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CpPAT10_0006 (gyrB)
DNA replication proteins [BR:cpz03032]
Prokaryotic type
  DNA Topoisomerases
   CpPAT10_0006 (gyrB)
DNA repair and recombination proteins [BR:cpz03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CpPAT10_0006 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim SPDY HATPase_c_3

Other DBs

NCBI-ProteinID:

AEK91350

Position

5565..7610

AA seq 681 aa
MATAEHEYGASSITILEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNSVDEAMAGHATH
VDVTLLEDGGVEVVDNGRGIPVDMHASGAPTVQVVMTQLHAGGKFDSDSYAVSGGLHGVG
ISVVNALSTRVEADIKLHGKHWYQNFSNAVPDELVQGGNARGTGTTIRFWPDAEIFETTT
FKFDIIARRLQEMAFLNKGLTLSLTDKRVSDEELELEAIADEGDTAENVSLEKIDSDADG
NIEAPAAPKKREKKKVFYYPEGLKDYVAHLNKSKQVIHPTIVAFEAKGDDHEVEVAMQWN
NGYAQSVHTFANTINTIEGGTHEEGFRAALTTLMNRYAREHRLLKEKESNLTGDDCREGL
SAVISVRVGDPQFEGQTKTKLGNTEVKGFVQRMVNEHVADWLDANPAEAKTIINKAVSSA
HARMAARKARDLVRRKSATDLGGLPGKLADCRSKDPVKSELYVVEGDSAGGSAKAGRDSL
YQAILPLRGKILNVEKARLDKVLKNAEVQAIITALGTGIHDEFDINKLRYHKIVLMADAD
VDGSHIATLLLTLLFRFMPQLIEEGHVYLAQPPLYKLKWGKGDPGFAYSDAERDSLLEEG
LAQGRKINKDDGIQRYKGLGEMNASELWETTLDPEFRVLRRVDINDAQRADEIFSILMGD
DVAARRSFITRRAKDVRFLDI

NT seq 2046 nt +upstreamnt +downstreamnt
gtggcaaccgctgaacatgaatatggcgcctcatccattacgatccttgagggtctagag
gctgtacgtaagcgccccggtatgtacatcggctcgaccggtgaacgcggcctacaccat
ttggtgtgggaggtcgtggataactccgtagacgaggcaatggctggtcacgccacgcac
gttgacgtcactctgttggaagacggcggagtggaggtcgtggataacggccgaggcatc
cccgtcgatatgcatgcctctggtgcaccgacggttcaggtcgttatgacgcagctccat
gctggtggcaaattcgattctgattcctatgcggtttccggtggtctccacggcgtgggt
atctctgtggtcaacgctctatccactcgcgttgaggccgacattaaacttcatggcaaa
cattggtatcaaaacttctccaatgccgttccagacgagctagtccaaggtggaaatgca
cggggaacaggaaccaccattcggttctggccagatgctgagatctttgaaaccaccacc
tttaagttcgacatcatcgctcgtcgtttgcaggaaatggcgttcctgaataagggactg
accctttctctgacggataagcgcgtgagcgatgaagaacttgagctggaggcaatcgct
gatgaaggcgatactgcagagaacgtttctctagaaaaaatagactccgatgccgatggg
aacattgaagcccctgctgctccgaagaaacgggagaagaaaaaggtcttttattacccc
gagggactcaaagactatgtcgcgcatctgaataaatctaagcaggtcattcaccccact
atcgttgcctttgaagccaaaggtgatgatcacgaggttgaagtggctatgcaatggaac
aatggttatgcgcaaagcgtgcatacctttgccaacaccatcaacacgattgaaggtggc
acccatgaagaagggttccgtgccgcgcttacaacgttgatgaaccgctacgcgcgtgaa
caccgactgctcaaagaaaaagaatctaatctcactggtgacgattgccgtgaagggctt
tccgcagttatttccgtcagagtgggtgatccccaatttgaagggcagactaagacaaaa
ctcggtaatactgaggtaaaaggctttgttcagcgcatggtcaatgagcatgtagcagat
tggctggacgctaaccccgcagaagcaaagaccattatcaataaagccgtgtcttctgct
catgcgcgtatggcggcacgtaaagcccgtgatctggtgcgccgtaaatctgcaacggat
cttggtggtcttccaggtaaattggcagattgccgctccaaggacccggtgaagtctgaa
ctttatgtggtagagggcgattctgcaggtggttccgctaaagccggtcgagattcccta
taccaggctatccttccgttgcgtggaaaaatcctgaatgtggaaaaagcacggttggat
aaggtgctcaagaacgccgaggttcaggcaattattactgctttgggcacaggcatccat
gatgagtttgacatcaacaagctgcggtaccacaagattgttcttatggccgatgctgac
gttgacggatcccacattgctacgctgctgcttaccttgttgttccgattcatgccacag
cttatcgaggaaggccacgtttatctggctcaaccgccgctgtacaagctcaagtggggt
aagggcgaccccggctttgcttattcggatgccgagcgcgactcgcttttggaagaaggc
ttagcgcaggggcgcaagatcaacaaagatgatggaatccagcgttataagggtctaggc
gagatgaacgccagcgagctgtgggaaaccacgcttgaccccgagttccgcgtactgcgc
cgagtggacatcaatgatgcacagcgtgctgatgaaattttctccatcctgatgggcgat
gacgttgcagctcgtcgtagctttatcacgcgtagagcaaaagacgttcgcttccttgac
atttag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

Download RDF

DBGET integrated database retrieval system