KEGG   Corynebacterium pseudotuberculosis PAT10: CpPAT10_0175
Entry
CpPAT10_0175      CDS       T01879                                 
Symbol
sigC
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
cpz  Corynebacterium pseudotuberculosis PAT10
Brite
KEGG Orthology (KO) [BR:cpz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpz03021]
    CpPAT10_0175 (sigC)
Transcription machinery [BR:cpz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CpPAT10_0175 (sigC)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF
Other DBs
NCBI-ProteinID: AEK91515
Position
complement(183742..184305)
AA seq 187 aa
MKNSERDDRVTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLRV
MGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTWS
DWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVRIGTIRSRVARARADVIAAAG
RPNAASA
NT seq 564 nt   +upstreamnt  +downstreamnt
atgaagaactcggaacgcgatgatcgcgtcacccaactggcactcgctgccggccgcggc
gacaaaaccgcgctcaccgagttcatccgagagacccaaaatgacgtctggcgcctgctc
gcccacctagggggcagcgaaatcgccgacgatctcacccaagagacctacctccgcgtc
atgggcgccctaccccgctttgcggcacgctcatcggcaagaacatggttactctcactc
gcacgccgcgtatgggtagacaatatccgtcatgacatggcccgcccccgcaaatcctcc
gcagaagtagaggaccttgaccccgccgtgctctccaccaatggcgaaaccacctggtcc
gactggattgacgtccgtttgcttatcgacgccctccctaccgagcgtcgtgaagccctc
attctgacgcaagtgctcggttactcctacgaggaagcagcaaaaatcgccaacgtccgc
atcggcaccattcgctcccgcgtagctcgcgcgcgtgccgacgtgatcgcagcagccggg
cgccccaatgcagctagcgcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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