KEGG   Chenopodium quinoa (quinoa): 110683358
Entry
110683358         CDS       T05764                                 
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03013  Nucleocytoplasmic transport
cqi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110683358
   03015 mRNA surveillance pathway
    110683358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110683358
   03041 Spliceosome [BR:cqi03041]
    110683358
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110683358
Spliceosome [BR:cqi03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    110683358
SSDB
Motif
Pfam: PWI Cornifin
Other DBs
NCBI-GeneID: 110683358
NCBI-ProteinID: XP_021715399
Position
Unknown
AA seq 873 aa
MSGGFFRGTSAEQDTRFSNKQAKLLKTQKFAPELEHLVDISKVKMDVIKPWIAKRVTELL
DGFEDEVLINFINGLLEGKVVNGKQIQIQLTGFMEKNTGKFMKELWSLLLSAQKNASGVP
QQFLDAKEEETRKKKEENDRIFNEIQRRKEKEREDSEQEKVRQMDDGLGKYSNDESSRRR
ERGSGAQSEDENGADVKNGFGGRSRASKSPSDHSQSPHRERSVSRSISGSPRPKRQSVSP
GRRHQSPRRRSVTPRRRSARESVSPRRRSLSRRRSPSRTRYRSPSPMRRRVRSPARRRSP
SPIRRMSPSPARRSPSPLRRRSRSPLRRRSPSPRRRRTPSPWRRRSPSPRRRRSPSPVRR
RRRRSSSSPRSRSPGLRRSPSPIRRRFQSPVRRPFPVRRRSPSPARRRSPSPARRRSPSP
ARRRSPMARGHRSPSPVEHRSLAPVRRKSPVPARSRSPTPSPSRSPSPASQSSGSPVRHI
SASPVKTRSPRIQNSPHGSPRDQNSDHEPAMMARRQPISLSPQRDNRKRSPRNVASVSPS
PEKSNAASPLSRKKSSGEDKRLASPYDSPEKKSGDKTTINGNRSPSRLRGHKVRHGSLEM
RGDKFDNDREYQADKYKSEEKKSGRSSVGNQRDSPDRSVRYQHRGNVDARQDDEIISEEA
SLKEVRALKKSPPRGTVSDERSDILYPGDVFKLDEKRNYQQKDTRDNTVSDSVVKLQNKR
RSPSVDSESGSEESEKHRAEVSEKRKHRRSRRREVASDDTSSESEMEDRKEAKRRKKEEK
KIRKEERRRRREERRRRKEEKRAGKRKRKSKDADALSSDVENNEKDTNAANGERRTTKYS
SDEEETESQKKRLEIELREKALESLRAKKGISR
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgtcgggcggctttttccggggtacgtcggctgagcaagacactcggttctcaaataag
caagcaaagttgctcaaaacgcagaagtttgctccagaactcgaacatttggttgatatt
tcaaaggtgaaaatggatgttatcaagccgtggatcgcgaaaagagtgactgaactcctt
gatggatttgaagatgaagtgctcattaactttatcaatggacttcttgaaggaaaggtt
gttaatggaaagcagatccaaattcagctgactggtttcatggaaaagaatactggtaag
ttcatgaaagagctttggtcgcttcttctcagtgcgcagaaaaatgctagtggcgtaccc
caacaattcctggatgctaaggaagaggaaactaggaagaaaaaggaggagaacgatcgt
atctttaatgaaatccagagaaggaaagagaaggaaagagaagattctgagcaagagaaa
gtgaggcaaatggatgacgggcttggaaaatattctaatgacgaatcaagtcgaagacga
gaaagaggttctggtgcgcaatctgaagatgagaatggagctgacgtgaaaaatggtttt
ggaggaagatccagagcatccaagtcaccatctgatcattctcaatcacctcatcgagaa
agaagtgtatcaaggagtatttctggctctcctaggccaaaaaggcaatcggtttctcct
ggaagaagacatcaatcgccccgaagaagatctgtcacacctaggaggcggtctgcccgg
gagtcagtgtctccaaggcggaggtctctttccagaaggcggtctccatctcgtacacgt
tataggtctccatctcctatgaggcgccgggtccgttctccagcacgtagaaggtcacca
tctccaattcgacgcatgtcaccttctcctgccagaagatcaccatctcctttaagacga
cggtctcgctcacctttgcgacggcggtctccttctcctaggaggcgtaggacaccttct
ccgtggcgtcgacgatcaccatcccctaggcgacgcagatccccttctcctgttcgtcgc
cgtaggagaaggtcctcttcaagtccgaggtctcggtctccaggtctgcgtaggtctccg
tctcctatacgacgtaggttccaatcccctgtcagaaggccttttcctgtccgacgtagg
tctccgtctcctgcacggcgtaggtctccgtctcctgcacgacgcaggtctccgtctcct
gctcgacgtaggtcccccatggcaaggggacaccgttctccatctccagtggaacataga
tctttagctccagttcggagaaagtcacctgttccagctcgtagtcgatcacctactcca
tcacctagcagatctccgtcacctgccagtcaaagttccggatcacctgtcaggcatatt
tctgcttcaccagttaagacaagatcacccaggattcagaattccccacatggatcccct
agagatcaaaacagtgaccacgagcctgcaatgatggctcgtagacagcctatttcattg
tccccccaaagagataatcgaaagcgttcacccagaaatgttgcgtctgtctcaccttct
ccagagaagtcaaatgcggcctcaccactatcccgcaaaaagagttctggtgaagataag
aggctggcaagtccatatgacagtcctgaaaaaaaatcaggggataaaacgaccattaat
ggaaatcggagtcctagtagattgagaggccacaaagttcgtcatggaagcctagaaatg
agaggagataaatttgataatgatagggagtatcaggcggacaagtacaagtcagaagaa
aaaaaatcaggacgctcatcagttggcaatcagagggattctcctgatcgatcagttaga
taccaacatcgtggtaatgttgatgcacgacaggatgatgagataataagtgaagaagct
tctttgaaggaagttcgtgctctgaaaaagtcaccacctagaggtactgtatcagatgag
aggtctgacatattgtaccctggggatgttttcaagttggatgaaaagaggaactaccaa
cagaaagatactagggacaacactgtgtctgactccgtagtgaaattacaaaataaacga
agaagtcctagtgttgactctgaatctggatctgaggaaagtgagaagcatagagctgaa
gtttctgagaagaggaagcatcgaaggtcaaggcgaagagaagtggcatctgatgatact
agttctgaatctgagatggaggatagaaaagaagctaagagaagaaagaaagaagagaag
aaaataagaaaagaggagcgacgtaggcgtcgtgaggagcggcgccggaggaaggaagag
aagcgtgctggtaaacggaagcgaaagtcaaaagatgctgatgccctgtcttctgatgtg
gaaaacaatgaaaaggataccaatgctgcaaatggtgaacgtcgtacaacaaagtattca
agtgatgaagaagagacagaatcacaaaagaagaggcttgagattgagctacgtgaaaag
gctcttgaatcactaagagcaaagaaggggattagccgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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