KEGG   Chenopodium quinoa (quinoa): 110706938
Entry
110706938         CDS       T05764                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    110706938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cqi04121]
    110706938
   03036 Chromosome and associated proteins [BR:cqi03036]
    110706938
Enzymes [BR:cqi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110706938
Ubiquitin system [BR:cqi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110706938
Chromosome and associated proteins [BR:cqi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     110706938
    Noncanonical PRC1 (PRC1.1)
     110706938
    Noncanonical PRC1 (PRC1.3/1.5)
     110706938
    Noncanonical PRC1 (PRC1.6)
     110706938
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-rbx1 zf-UDP zf-RING_6 zf-Nse TRAF3_RING ZNF512_C2H2 zf-RING_11
Other DBs
NCBI-GeneID: 110706938
NCBI-ProteinID: XP_021740631
Position
Unknown
AA seq 456 aa
MPAQKRSAEDNYSDEDPPNNAAVNHAGDVPENDGDEQHDVVANDDDDEAQQEEEEDGDEE
DEEDDDDDAEDDEGDKHGGGGVADRTPSFITNGNVNKEGLILIKLSDIRKEVQCPICLGI
IRKTRTVMECLHRFCRECIDKSMRMGNNECPACRKHCASRRSLRDDPNYDALIAALYPDI
DRYEEEELAFQEDERVRNKQIQAAIAQTFRLQTEALSRKRKRSQSNHRKRRNYRSDDDDD
ANGHDGGKDSSSADERCTEPKSKRSKRWRGQPSPAAASGDGGGDENDQEVHRDAGVSPAA
FVGTSEILAWGKGGLRSSTRYGSGNGGNVKHSRGRFVKLTDYFRTWEQNESELDIQVVLV
SLDEQKEHLLEHSYLCGRPALSVGQICEFISLQTSLPPDKVEILGAKGSSLSSTAFEACK
DELQVLNSEETLAGLKASSNFTQGHLMLAYRKKLSV
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgccagcgcagaaacgttcggcggaggataactactccgacgaggatcctccgaacaac
gccgccgtcaatcacgccggtgatgtcccggagaacgacggtgatgagcaacacgatgtt
gttgcgaatgatgacgatgatgaagcacaacaggaggaggaagaagatggagatgaagaa
gatgaagaggatgatgatgatgatgcggaagatgatgaaggtgacaagcatggcggcgga
ggagtggccgatcgaactccgtcgtttatcactaatggtaacgtcaataaggaaggatta
atattaattaaactgtcagatattcgcaaggaagtacaatgtccaatatgtcttgggatc
atccgtaagacaagaacagttatggaatgtctgcatcgcttctgcagagaatgcattgac
aaatcgatgcggatggggaacaatgaatgccctgcttgccgtaagcactgtgctagtcgg
cggtccttaagagatgatcccaattatgatgcactgattgctgcattatatcctgatatt
gatcgatatgaagaagaggagctggcttttcaggaagatgaaagagttcgaaacaagcag
atccaagctgcaattgcacaaactttccgcctacagacagaagcacttagccggaaaagg
aaaagatcacagagtaatcatcgaaaaagaagaaactataggtctgacgatgatgatgat
gccaatggtcatgatggtggtaaagattcatcttctgcagatgaacgttgcacagagcct
aaatccaaaagatcaaagaggtggagaggtcagccatcgccagcagccgctagtggagat
ggaggtggtgatgaaaatgatcaggaggtccacagggatgctggggtttcaccagcagca
tttgttggaacctcagaaattcttgcctggggtaaaggtggcttacggagtagtactaga
tatgggagcggcaatggtggcaatgtcaagcactctcgtggtcgttttgtgaagttgact
gattattttcggacatgggagcagaatgaaagtgagttggatattcaagtagtgcttgtt
tctctcgacgagcagaaagaacatcttcttgagcattcctacttgtgtggcaggccagcc
ttatctgtggggcaaatatgcgaatttatttctcttcagacctcgttaccacctgataaa
gttgaaattttgggagcaaaaggaagctctttaagttcgactgcatttgaggcatgcaaa
gatgagttgcaagtgttgaattctgaagaaactctggctggactcaaagcttcgagcaat
ttcactcaaggccacttgatgttggcatatcggaaaaagctgtcagtgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (29)   

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