KEGG   Chenopodium quinoa (quinoa): 110715047
Entry
110715047         CDS       T05764                                 
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
cqi  Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqi03041]
    110715047
Enzymes [BR:cqi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     110715047
Spliceosome [BR:cqi03041]
 Complex C
  Other components
   Complex C specific factors
    110715047
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C AAA_22 DEAD HA2_N AAA_30 AAA_19 AAA_7 T2SSE
Other DBs
NCBI-GeneID: 110715047
NCBI-ProteinID: XP_021749310
Position
Unknown
AA seq 701 aa
MAKFWKPGTEKPRLVEDEDGGVLFFHSSSSSSSSSFGYANNIQQQRQRLPVHKRRDAILF
LVENHATTIVVGETGSGKTTQIPQYLNEGGWADSGHVIACTQPRRLAVQSVASRVAEEMG
VKLGEEVGYVIRFEDVTTPGVTRIKFLTDGVLLREMMDDPLLSKYSVVMVDEAHERSIST
DVVLGLLKKIQRRRPELRLIISSATIEAKSIASFFRVSKKQRGGAGDELGPKTEPAIISV
EGRGFTVEINYVQEPVADYLRAAVSTVMLIHKQQTVGDILVFLTGQDDIDAAVQLLNEEA
QSSDRSSGELLALPLYSGLSRAEQDLIFSPTPRGKRKVIISTNIAETSLTLEGIVYVVDS
GFSKQRFYDPLSDIENLVVAPISKASARQRTGRAGRVRPGKCYRLYTEEYYVNEMPAEGI
PEMQRSNLVSCVIQLKALGIDNILNFGWPASPSPEAMIRALEVLYSLGVLDDDAKLTSPT
GFQVAEIPLDPMLSKALLVSNELGCSEEMLTIASVLSVQSIWISVRGAQKQLDEAKLRFA
AAEGDHVTFLNVYKGFLQSGKSSKWCHKNFINYHAMKKVLETREQLKRTAQRLGIVLKSC
DRDIQVVRKAITAGFFANACHLQTYSHEGKYKTVRTSQDVYIHPSSVLFRVNPKWVVYYS
LISTDRRYMRNVVTIDPTWLVEVAPHYYQYQGPGSSATLPR
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggcgaagttctggaagcctggaaccgagaaacctcgactggtagaagacgaagatggc
ggcgttctcttcttccattcttcctcttcatcttcatcttccagcttcggatacgccaac
aacatccagcagcagcgccagcgcctgccggtgcataagcgcagagacgccattctcttt
ctagttgaaaatcatgctactaccattgttgtcggcgaaactggcagcggaaaaactact
caaattcctcagtatttgaatgaaggaggatgggctgattctggtcatgttattgcttgc
actcagcctcgccgtctcgctgttcagtcagttgcttcaagggttgctgaagaaatgggt
gttaaacttggcgaggaggttggatatgtaatcagatttgaagatgtaacaactccgggt
gttaccagaattaagtttcttactgatggagtgttgctgagggaaatgatggatgatcct
cttctgtccaagtacagtgttgtcatggtagatgaagcacatgaaaggtctatttcaact
gatgttgtacttggtctcttgaaaaagattcaaaggcgtaggcctgaactgcgtttgatt
atatcatctgctactattgaagcaaaatccatagcttctttcttcagagttagtaagaag
cagcgaggaggagctggtgacgaacttgggccaaagacagaacctgccattatctcagtt
gagggaagaggctttactgttgaaataaattatgttcaggagccggttgcagactatctt
cgagctgctgtatcaactgttatgttgatacacaaacagcaaacagtgggtgatatcctt
gtattccttacgggtcaagatgatattgatgcagctgttcagctgcttaacgaagaagct
cagagttctgatagaagctcaggagaattgctcgctctgcctttatactccggactttca
cgtgctgagcaggacttgatcttttctcctactcctagagggaaaaggaaggttataata
tcgacaaatattgcagagacatcattgactttggagggcatagtctatgttgttgatagt
ggcttctcaaaacagcgtttttatgatccgctgtcagatattgagaatttggtggtggca
cccatatcaaaggcttctgcaagacaaaggacaggtagggctggaagagtgagaccaggg
aaatgttacaggttatataccgaggaatattatgttaatgaaatgccagctgaggggatt
cctgagatgcagagatcaaaccttgtctcctgcgttatacagttgaaggctctaggaatt
gataatatcttgaattttgggtggcccgcatcaccatcaccagaagctatgattagagct
cttgaagtattgtactctctaggtgtgcttgatgatgatgccaagctcacttcacctact
ggattccaagttgctgaaattccactggatcccatgctttcaaaggctttgcttgtgtct
aatgaactagggtgttcagaggaaatgcttactattgcatcagttctttctgtacagtca
atctggatctctgtaaggggagcacagaagcagctagatgaagccaagctccgatttgct
gctgctgagggtgaccatgtgactttcctaaatgtgtacaaaggatttctgcagtccggc
aaatcatcaaaatggtgtcacaagaactttattaactatcatgctatgaaaaaagttctg
gagaccagagaacaactcaaaagaacggcacagcggctgggtatagtcttgaaatcttgt
gacagagatatacaggttgtaagaaaggcaataactgctggattttttgctaatgcttgt
catttgcaaacatacagtcatgaaggaaaatacaagactgtccgtacttctcaggatgtt
tatatccacccttcatctgttttgttcagagtcaacccaaagtgggttgtatactattct
ctcatctcgactgatcgtcgatacatgcgcaatgttgtgacaatagatcctacatggctt
gtagaggttgccccgcattattatcagtatcaagggcctggttccagtgctactttgcct
aggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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