KEGG   Chenopodium quinoa (quinoa): 110735719
Entry
110735719         CDS       T05764                                 
Name
(RefSeq) sm-like protein LSM3A
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03018  RNA degradation
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110735719
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110735719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110735719
   03041 Spliceosome [BR:cqi03041]
    110735719
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110735719
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110735719
Spliceosome [BR:cqi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110735719
 Complex C
  U2 snRNP components
    110735719
SSDB
Motif
Pfam: LSM TIG_SUH Glutaredoxin
Other DBs
NCBI-GeneID: 110735719
NCBI-ProteinID: XP_021771595
Position
Unknown
AA seq 98 aa
MASTEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGEVEEVVTSV
EIDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA
NT seq 297 nt   +upstreamnt  +downstreamnt
atggcgtcgacagaagaagagagcgcagttaaggagcctctcgatctcattcgtctcagt
ctcgatgaacgtatttacgtcaagcttcgttctgaccgcgaacttcgtggcaaactccat
gcttatgatcagcatttgaatatgattcttggagaggttgaggaagttgtgacatctgtg
gaaattgatgatgagacttatgaggaaatcgttcggactacaaggcgcactgttccattt
ctctttgttagaggagatggtgtcatattggtgtcaccgcctcttaggacagcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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