KEGG T05764: 110738260

Chenopodium quinoa (quinoa): 110738260

Entry

110738260         CDS       T05764

Name

(RefSeq) dicer-like protein 4 isoform X1

K11592

endoribonuclease Dicer [EC:3.1.26.-]

Organism

cqi Chenopodium quinoa (quinoa)

Brite

KEGG Orthology (KO) [BR:cqi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cqi03036]
    110738260
Chromosome and associated proteins [BR:cqi03036]
Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    110738260
   microRNA pathway
    RISC loading complex
     110738260

SSDB

Motif

Pfam:

Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer DEAD Helicase_C DND1_DSRM dsrm ResIII PAZ

Other DBs

NCBI-GeneID:

110738260

NCBI-ProteinID:

XP_021774327

Position

Unknown

AA seq 1632 aa
MGDYSPTADDFSPEIESGITLIPPIPKEDPWIIARKYQLELARKALDENVIVVLETGCGK
TLIAILLMCDMADLIRKPQNNVCIFLAPTVVLVHQQARVIQHFTDFKVGTYCGDDAKHLK
THIGWERELEQYEVLVMTPQVLLRNLCHCFIRMESVALLIFDECHYAQLESNHPYAEIMK
VFYDTKVNKVPRIFGMTASPICGKGASINSLQALLHAKVYTVNDKRELETVVVSPVVEVY
HYSSSEIMSSAQKKCLDKLEEVKRQCTSMLSRTGDDLARVQNTKKLLQKLHNNMVFSLTS
LGLWGALQACHILLNGGVWERDELIDAKGNSSDDLLQNEYLAQTASLLDAECMGEATEGT
ADMFCNKLLREPFFSQKVLRLVGILSNFRSRRDMKCIIFVNRIIIARSLAYILGQIKILS
AWKCDYLVGVHSKRMSRKTMYNILEEFRSGKLNLLVATKVGEEGLDIQTCCLVIRFDLPE
TLASFIQSRGRARMPQSEYIFLVDSESEREINLMDSFRKDENLMNMNIRDRKPNGVIANN
KEEIYSVDSTGATISTQTGVSLLYHYCSKLPHDEYFSPMPDFYNVDDTEGIICHIILPSN
APINHIVSAPQSSKEAAKKDACLRACEELHQVGALTEYLLPEQDDVRESHDVSDSESTED
EDSPYELQEMVIPAALKEPWSDQDNLVCLYSYFIRFKPKPHDRKYKDFGLFIKSPLPLEA
EQMKIDLHLAHGRSVFTDLIPFGVAEFSKEEMLQALNFQEMCLKIILDRSEFMCGHVPLE
KNKVNESSSSVFYLLLPVISRQYDSSISVDWMTIRRCLSSPIFAPPDQLSDTCISLDSHL
QLADGPASVNDILNSLIYVDHRKSFFFVSKILPDKNGHSLVNSSTSHVDHLSEKFEINLT
HPGQPLLQAKQLFCLHNLLHDRPTGNSESHELDEYFFELPPELCELKIIGFSKDIGSSLS
LLPSVMHRLESFLVALELKDMLSKSFPEGVVVTAERVFEALTTERCHEGFSLERLEVLGD
SFLKFAVGRHLFLKHEAFDEGQLTRRRSNLVNNSNLCKLAIKNKLQGFIRDQEFDPSQFY
ALGRTCSVICTKQTESSIHCVSEDRILVDNRQVRCSKNHQWLTKKTIADVVEALIGAYIV
DSGFKSAIAFLGWFGIHIEFEISQVCHAWTASSRFMSLADRISISEIECVLGHHFVHRGL
GLQAFVHPSYNKHGGGCYQRLEFLGDAVLDYLITSYLYSVFPDLKPGQLTDLRASLVNND
SFAKAAANALYKFILCENSNLSNAINKYLDFIRKPASERNVLEEPSCPKALGDLVESCFG
AVLLDSGFDLDHVWKLMHSFMNPIMKYANLHFIPTRELKELCQYHGLNLEYVISKRNRSF
MVEAIVKGKSFHVAESAMYRNTKGAKRMAARKAIEKLKAQGCRLKTSLEEVLKTLRKMEP
RLVGYDEMPLSLVSSSDLPNVGNLCVEDHSHTSVNPELTFRNLSLNDCPILNDSASPEPN
VYEMPTIVSSSQKKSTIAPVSSYKRRQHSQDTGGENCSIDSDVHGSLGKATAKSRLNEIC
VRNCWKPPLYECCKEEGPSHLKLFTFKVMVVIEEAEDVILECFGQPQAKKKAAAEEAAEG
ALWLLKKEGYIR

NT seq 4899 nt +upstreamnt +downstreamnt
atgggcgattattctccaactgctgatgatttttccccagaaattgagtcggggatcact
ttaattccccctattccgaaggaagatccctggattatagctcgaaagtatcagttagaa
ttggcaagaaaagctttggatgaaaatgtgattgtggttttagagactggttgtgggaag
acccttattgctattctattaatgtgtgatatggctgaccttataagaaagcctcaaaac
aatgtctgtattttcttggctcctactgtcgtattagttcatcagcaagctagggttatt
caacacttcactgatttcaaggttggaacctactgtggtgatgatgccaaacatttgaag
actcatatcggctgggaaagagagcttgagcaatatgaggttcttgttatgactccacaa
gttttgctacgtaatctatgccattgcttcatcaggatggagtcagttgctctcttaata
tttgatgagtgtcattatgcgcaacttgagagtaatcatccctacgcagagattatgaag
gtcttttacgatacgaaggttaataaagttccgcgcatttttggcatgactgcatctcct
atatgtgggaaaggggcctctatcaatagtcttcaagctttacttcatgctaaggtttat
actgttaatgacaagagagaactggaaacagttgttgtatctcctgtggttgaagtgtat
cactatagctcaagcgaaataatgtcgagcgctcaaaagaagtgtttggataaactggag
gaggttaaacgtcagtgtacatctatgctttccaggactggagatgatcttgctagagta
cagaacaccaagaaacttctgcaaaaacttcataacaacatggtgttttcattaaccagc
ctcggcctttggggagcattgcaagcatgtcacatccttctgaatggtggtgtctgggag
agagatgagctgatagatgcaaaaggaaactccagtgatgacttgttacaaaatgagtat
cttgctcagactgcatctcttctagacgcagagtgtatgggagaagccactgaaggaacg
gctgacatgttttgtaacaagcttctaagggagccatttttctcgcaaaaggttttgcgt
cttgttggaatcttgtcaaatttcaggtcaaggcgtgatatgaaatgtataatatttgtg
aataggattatcattgccagatctttggcatatatccttggacaaattaagatcttatct
gcttggaagtgcgattacttggttggagtccactcaaagcgtatgtccagaaaaaccatg
tataatattttagaagaatttcggtctggaaagctgaatctgttggttgctactaaagtt
ggtgaagaaggacttgatatacagacatgctgtcttgtaatacggtttgatcttcctgaa
actctggcaagctttatacaatccagaggtcgtgcacgaatgcctcaatcagaatatatt
tttttggtcgacagtgaaagcgagagagaaataaatctgatggacagttttaggaaagat
gagaatctcatgaacatgaatattagagacagaaaacccaacggagttattgccaataac
aaagaagagatatattcagtggattcaactggtgctaccattagtactcaaactggcgtt
tcattgctctaccattattgctctaaattgccacatgatgaatacttttcccctatgcca
gatttctataatgttgatgatacggaaggaatcatatgccacattattcttccttctaac
gctcctattaatcacatagtgagtgcacctcaatcttcaaaagaagcagctaagaaagat
gcttgtctaagggcatgtgaagaattgcatcaagttggtgccttaactgagtatctgttg
ccagaacaagatgatgtgagggaaagccatgatgtttctgattctgagagcactgaagat
gaggattcaccttatgagctacaggagatggtaattccggctgcattgaaggaaccttgg
tctgatcaggacaaccttgtttgtctgtactcctactttataaggtttaaacctaaacca
catgatagaaagtataaagacttcggactttttataaaatcacctctgcctcttgaggct
gagcaaatgaagattgatcttcatcttgcccatggtagatctgtgtttactgatctgatt
ccctttggagttgcagaatttagcaaagaagagatgctgcaggcactgaattttcaggaa
atgtgcctgaagatcatccttgataggtctgaattcatgtgtggtcatgttccccttgag
aaaaataaagttaatgaatcgagttcatccgtcttctatctgttgctccctgtcatttct
cgacaatatgacagctcaatatctgtggattggatgaccattaggaggtgtttgtcatcg
ccaatattcgcgcctcccgatcaattatcggatacctgtatttctctggatagtcatttg
cagcttgctgatgggcctgccagtgtgaatgatatcctaaatagcttaatatatgttgac
cacagaaagtcattcttctttgtttctaaaattcttcctgacaagaatggccatagtctt
gtcaacagttctacaagccatgtagatcacctgagtgaaaagtttgaaatcaatctaact
caccctggacaacctctactacaagctaaacagcttttttgcctacacaatttgttgcat
gaccgcccaacggggaattcagagtcacatgaactagacgagtacttcttcgaattgcct
cctgagctatgtgaactaaagataattggcttctctaaggacattgggagttcattgtct
ctgttgccatctgtcatgcatcgcctggaaagctttcttgtagcacttgaattgaaagat
atgttgtcaaagtcatttcccgagggagtggtggttactgctgaacgcgtttttgaagca
ttgactacagaaagatgccatgagggcttttctcttgagaggcttgaagttcttggtgat
tcttttctcaagtttgcagtggggagacacctatttcttaagcatgaagcttttgacgaa
gggcagttgactaggaggcgttcaaatttagtgaacaattcaaatttatgcaagttggct
attaagaacaaattacagggattcatacgtgatcaagaattcgatcctagccagttttat
gctttaggtcggacttgctctgtcatatgtaccaagcagacggaaagttcaattcattgc
gtctctgaagatagaattctggtagataatcgtcaagttagatgcagtaagaatcatcaa
tggttaaccaagaaaacaattgcagatgtagttgaagcattaattggagcctacatagtt
gatagtggctttaaatcggcaattgcgtttctcggatggtttggtatacatattgaattt
gaaatttctcaagtatgtcatgcttggacggcaagctccaggtttatgtcacttgcagac
cgtattagtatttctgaaattgaatgtgttttgggtcatcattttgttcacagaggctta
ggtctgcaagcatttgtacatccatcatataataagcatggaggaggttgttaccagaga
ttggagtttcttggtgatgctgtgttggattatttgatcacatcctatttgtactctgtg
ttccctgacctaaaacctggccagttgactgatttgagagcatcccttgtgaataatgac
tcatttgccaaagcagcagctaatgcattgtacaaattcattctatgtgagaatagcaac
ctgagtaatgctattaataaatatttggactttatcagaaagccagcttcagaaagaaat
gtacttgaggaaccgtcatgcccaaaggctctgggagacttggttgagtcttgttttggg
gctgttcttcttgattcagggtttgacttagatcatgtgtggaagttgatgcactcgttt
atgaatcctatcatgaaatatgctaatctgcactttattcctactcgagagctgaaggag
ctatgccagtatcatggcttgaatttagaatatgttatttcaaaaagaaatagaagtttc
atggttgaggcaatagtgaaaggaaaaagttttcatgtcgctgaatctgcaatgtatcgc
aatactaaaggagctaagagaatggctgcacggaaagctattgaaaaactgaaggctcag
ggttgtcgtctgaagacatcattggaggaggtcctaaaaacgctgcgcaaaatggaacca
aggctggttggatatgatgagatgcctctgtcgctagtgtcttccagcgatctgcccaat
gttggaaatttgtgcgtggaggatcattctcatacttctgtgaatccagaactcactttc
agaaacttgtctttgaatgattgtcctatcctcaatgacagtgcaagtccagagcccaat
gtatacgaaatgccaacaattgtctctagttcccagaaaaaatccaccatagcacccgtt
tcttcgtacaagagacggcagcatagtcaagacactgggggtgaaaattgtagcattgac
tcagatgtgcatggtagcctgggaaaagcaactgcaaaatcgcgattgaatgagatttgc
gttagaaactgctggaaaccccctctttatgagtgctgtaaagaggaaggaccaagccat
ttgaaattgttcactttcaaggtaatggtggtaatcgaggaagcagaagatgtgatattg
gagtgctttggccaacctcaagcaaaaaagaaagctgctgcagaagaagcagcagaaggt
gcactttggctgttgaagaaggaaggttacatcagataa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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