KEGG   Chenopodium quinoa (quinoa): 110738340
Entry
110738340         CDS       T05764                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110738340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110738340
   03041 Spliceosome [BR:cqi03041]
    110738340
   03032 DNA replication proteins [BR:cqi03032]
    110738340
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     110738340
Spliceosome [BR:cqi03041]
 Complex A
  U1 snRNP components
   Sm proteins
    110738340
  U2 snRNP components
    110738340
 Complex B
  U1 snRNP components
    110738340
  U4/U6.U5 tri-snRNP components
    110738340
 Complex C
  U2 snRNP components
    110738340
DNA replication proteins [BR:cqi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     110738340
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 110738340
NCBI-ProteinID: XP_021774403
Position
Unknown
AA seq 131 aa
MSRSLGIPVKLMHEATGHVVTVELKSGELYRGTMIECEDNWNCQLDSITFTAKDGKVSQL
EHVFIRGSRVRFMIIPDMLKNAPMFKRLDARIKGKSTSLGVGRGRAVAMRAKTQATGRGT
PGRGVVPPVRR
NT seq 396 nt   +upstreamnt  +downstreamnt
atgagtagaagcttgggaattccggtgaagttgatgcacgaagccactggtcatgtggtt
actgttgagctcaaaagcggtgagctttatcgaggtaccatgattgagtgtgaagataac
tggaactgtcaactcgatagcattacttttactgccaaggatggaaaggtctcccaactt
gagcatgtattcattcgaggcagtagagtcaggtttatgataataccagatatgctgaag
aatgctccaatgtttaaacgtctagatgccagaatcaagggaaagagcacatcacttggt
gttggccgtggtcgtgctgtagcaatgcgggcaaagactcaggctactggtcgtggtacc
cctggcaggggagttgtgccaccagtgcggaggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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