KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ000358
Entry
CpipJ_CPIJ000358  CDS       T01079                                 
Name
(GenBank) TFIIH basal transcription factor complex p34 subunit
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03022  Basal transcription factors
cqu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CpipJ_CPIJ000358
  09124 Replication and repair
   03420 Nucleotide excision repair
    CpipJ_CPIJ000358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqu03021]
    CpipJ_CPIJ000358
   03400 DNA repair and recombination proteins [BR:cqu03400]
    CpipJ_CPIJ000358
Transcription machinery [BR:cqu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CpipJ_CPIJ000358
DNA repair and recombination proteins [BR:cqu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CpipJ_CPIJ000358
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-ProteinID: EDS37566
VectorBase: CPIJ000358
UniProt: B0VZZ4
AA seq 292 aa
MDENNDTSLLVIVLDTNPSQRIIRENPHHLTQCLDSIVGFANAHLMQKAHNKLAVLACHH
HATEFLYPNPGKPLDIRQVDGQYEQFTLVEKTIKQKLARMINEAPRLAAPTESLLAGSMA
MALCYIARINRNKPAGVKINSRILVVTGSNECASQYMTYMNVFFTAQKQNVTLDVCALDK
PLSLLQQGCDITGGQYLKLPQLDGFLQYLLWVFLPDPQMHPQMRCKLVLPPPVKVDYRAA
CFCHRELIDIGYVCSVCLSIFCKFSPICTTCHTVFKAPAPIAAKPKKKKMKT
NT seq 879 nt   +upstreamnt  +downstreamnt
atggacgaaaacaacgacaccagcttgctggtcatagtgttggacacgaacccgtcgcag
cgcataatccgcgagaacccgcaccacctgacgcaatgtctggactcgatagtgggtttc
gcgaacgcccacctcatgcagaaggcccacaacaaactggccgtgctggcgtgccaccac
catgcgaccgagttcctgtacccgaacccgggcaaaccgctggacattcgtcaggtcgat
gggcagtacgagcagtttacgctggtggagaaaaccatcaagcagaagctggcccggatg
attaacgaggcgccgaggttggccgctccgacggaatcgctgctcgccggcagtatggcc
atggccctttgctacatcgctaggataaaccgaaacaaaccggctggagtgaaaatcaac
tcccggatcctagtggtcaccggaagcaacgagtgcgcctcgcagtacatgacctacatg
aacgtgtttttcaccgcccaaaagcagaacgtcacgctggacgtgtgcgcgctggacaaa
ccgctcagtcttctgcagcagggctgcgacatcaccggcggacaatacctgaagctgccc
cagctggacggatttctgcagtatttgctgtgggtgttcctgccagatccacagatgcat
ccacagatgcgttgcaaactggtgctgcctccaccggtgaaagtggactaccgagcggcc
tgtttctgccaccgcgaactcatcgacatcggttacgtctgctcggtttgtctgtccatc
ttttgcaagtttagcccgatctgcacaacctgccacaccgtcttcaaggcacccgcgccc
attgcggccaaaccgaaaaagaaaaagatgaaaacctaa

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