KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ018157
Entry
CpipJ_CPIJ018157  CDS       T01079                                 
Name
(GenBank) exosome complex exonuclease RRP46
  KO
K12590  exosome complex component RRP46
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CpipJ_CPIJ018157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqu03019]
    CpipJ_CPIJ018157
Messenger RNA biogenesis [BR:cqu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CpipJ_CPIJ018157
SSDB
Motif
Pfam: RNase_PH MAP
Other DBs
NCBI-ProteinID: EDS27152
UniProt: B0XFZ4
AA seq 217 aa
MIVDESKDSLRPMFCELNILTRSDGSAMLTQGETAVTASVNGPVEVKLQHMNVEKSYVEI
HFRPRSGMGSVNDRLLENLIRNTYESALLTALHPRTAVSIQIQEMQDRGGLVACAINAVC
LALIDSGIEMKYLVAAVHSVLDEEGGITLDPDELRAKDARARFTFVFENTSRNTVSIYTH
GKFTSEQYHRALRMSTDAVGRVFDFYRTIVAKQQNVL
NT seq 654 nt   +upstreamnt  +downstreamnt
atgattgtcgacgaaagtaaagactcgctgaggccaatgttttgcgagctcaacatttta
acccgttccgacggttccgcgatgctgactcaaggtgaaaccgccgtcaccgcgtccgta
aacggtcccgtcgaggtcaagctgcagcacatgaacgtggaaaagtcctacgtggagatt
cacttccggccgcggtccggaatgggcagcgttaacgaccggctgctggaaaacctcatc
cggaacacgtacgaatcggcgctgctgacggcgttgcacccgcgcacggccgtctccatc
cagatccaggagatgcaggaccgcggcgggctggtggcgtgcgccatcaatgccgtctgc
ttggccttaattgacagtggcatcgagatgaagtacctggtggcggccgttcacagcgtt
ctggacgaagaggggggcattacgctcgatccggacgagctgcgggccaaggatgcgcgg
gcgcggtttacgttcgtgtttgaaaatacgtcgcggaatacggtctcaatttacacgcac
gggaagttcacctcggaacagtaccaccgggcgctccggatgagcacggatgccgtgggg
agggtgtttgacttttaccggaccattgtggccaagcagcagaatgtgttgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (5)   

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