KEGG   Capsella rubella (pink shepherd's-purse): 17874571
Entry
17874571          CDS       T02984                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 36 isoform X1
  KO
K12190  ESCRT-II complex subunit VPS36
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:crb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    17874571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crb04131]
    17874571
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crb04147]
    17874571
Membrane trafficking [BR:crb04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    17874571
Exosome [BR:crb04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   17874571
  Exosomal proteins of colorectal cancer cells
   17874571
SSDB
Motif
Pfam: EAP30 Vps36_ESCRT-II PH_TFIIH Flagellin_N
Other DBs
NCBI-GeneID: 17874571
NCBI-ProteinID: XP_006279451
UniProt: R0G767
Position
Unknown
AA seq 439 aa
MASGSSIGVGVLFENAEVTTSGRPVLRRNEVECFLLSSVEFDSEDDPPRFTTLKSGNLIL
TTHRLIWIPSQSNGAVPSSISLAAVTHIYSHKKSIKSMFHSPRIRFQADPGAIVVTIVFR
GKGDIDGFLTKFWECWRGRAWEEEEKSESETSRSGSGTVAQGLYGNDGTVRMVGLAGILR
KEQEQWESTDKSLQDAFQDLNALMSKAKEMVSLAEKMRQKLLSAPSSQNGSTDDEEMGSK
EEMQQWMLSVGIISPVTKESAGALYHQELSRQLADFVRIPLEQAGGMISLTDMYYHFNRA
RGTELISPDDLWQACTLWEKFDVPVMLRKFDSGVMVIQNKSHSDEEVMSRIRMLVTKTET
LRAGVTASDAALTLKIAPAMAKEHLLTAETKGLLCRDMSPDGLRFYFNLFPEIDPTSQHI
AKDFGTYGVWVKATSMLSV
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggctagtggaagcagcatcggagtcggtgttttgtttgagaacgcagaggtgactacc
agtggtagaccagtgcttcgacgcaatgaggttgagtgtttcctactctcctccgtcgaa
ttcgattccgaagatgatccgccgcgattcaccactttgaagtccggtaatcttatcctt
accactcatcgtctcatttggatcccttctcaatcaaatggagctgttccttcttcgatt
tctctcgccgccgttactcatatctattctcataagaaatcaatcaagtctatgttccat
tcgccgagaatccgatttcaagcggatcctggtgcgattgtggtgactattgtctttagg
gggaaaggagatattgatggatttttgacgaaattctgggaatgttggagaggcagagca
tgggaagaggaggagaagagcgaaagtgagacttctcggtcaggatctggaacggttgcg
caaggtttatacggaaacgatggaactgtgaggatggtgggattggctgggatattgagg
aaagagcaagaacagtgggagagcacagacaagagtttgcaagatgcttttcaggatttg
aatgctcttatgagtaaggctaaagagatggtgagcctggcagaaaaaatgcggcaaaag
ctcttgtctgctcctagtagtcagaatggttcaactgatgatgaagaaatgggttccaaa
gaagaaatgcaacagtggatgttgagcgttggtattatctctccagttacaaaggaatct
gctggtgccttgtaccatcaagaattgtcccgccagttggcagattttgtcagaatccca
ttagaacaagctgggggaatgatcagtcttactgatatgtattaccacttcaatcgtgct
cgtgggacagagttgatctctccagatgatttgtggcaagcttgtaccctgtgggagaaa
tttgatgttccagtaatgctgcggaaatttgatagcggtgtgatggtcatccaaaacaag
tcccatagcgatgaggaggtgatgagtagaatcagaatgcttgtgaccaaaactgaaact
ttaagagccggagtcactgctagtgatgcagctttgacgctcaagatcgctccagccatg
gctaaggaacatctactaactgcagagaccaaaggtttgctgtgtagagacatgagccca
gatgggcttcgattctatttcaacctgtttcctgagatcgatcccaccagtcaacatata
gccaaggactttgggacgtacggtgtatgggtcaaggcgaccagtatgttgtccgtatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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