KEGG   Capsella rubella (pink shepherd's-purse): 17875911
Entry
17875911          CDS       T02984                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crb03041]
    17875911
   03009 Ribosome biogenesis [BR:crb03009]
    17875911
Spliceosome [BR:crb03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    17875911
Ribosome biogenesis [BR:crb03009]
 Eukaryotic type
  90S particles
   Helicases
    17875911
  Pre-60S particles
    17875911
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII
Other DBs
NCBI-GeneID: 17875911
NCBI-ProteinID: XP_006280206
UniProt: R0G979
Position
Unknown
AA seq 601 aa
MADLGLEQHSSESEEIKKMKKESKKRVRDEAKKRETGEENEASIEEESTKKKKKKKKKLK
ERGDTDDEAVTAVSDEEPKKKKKKKKKDVKVEFGEEDNGEEKDGDKAGETSGNGIMTNQT
FESLELSDKTLKTIKEMGYQRLTQIQAKSIPILMEGKDVLGAARTGSGKTLAFLIPAVEL
LYNVKFLPRNGTGVIVICPTRELAIQSYGVAKELLKYHSQTVGKLIGGENRKKEVEILVK
GVNLLVATPGRLLDHLENTNGFVFSNLKLLVMDEADRILEQNFEEDMKKIIELLPKKRQT
SLFSATQTAKVEDLARVSLKSPVYIDVDEGREEVTNEGLEQGYCVVPSAKRLIFLLTFLK
RFLGKKKIMVFFSTCKSAKFHAELFRYIKIDCLVIHRGIDQNKRTSTFFQFIKAETGILL
CTNVAARGLDIPHVDWIVQYDPPDNPKEYIHRVGRTARGEGAEGKALLVLNQKELKFIQY
LKEAKIPVEEHEYEEKKLLNSQNFLENLITQNYALEASAKEAYKSYISGYDSHSMKDVFD
VHLLDLKEVAASFGFSNPPRVSLKIDRGTYKSKREPVNKFSRAGGSRARGGRAGGKKFER
F
NT seq 1806 nt   +upstreamnt  +downstreamnt
atggcggatttgggattggaacagcattcatcagaaagtgaagagattaagaaaatgaag
aaggagagtaagaaaagagtgagagacgaagcgaagaaacgagaaactggggaagagaac
gaagcgtcaatcgaagaagaatcgacgaagaagaagaagaagaagaagaagaagctaaag
gagcgtggagatactgatgacgaagcggtaacagctgttagcgatgaggagccgaagaag
aagaagaagaaaaagaagaaggatgtgaaagtggagtttggagaagaagacaatggcgaa
gagaaggacggagacaaagcgggggaaactagtgggaatgggataatgactaatcaaacg
tttgagtcattggaattatctgacaagactttgaaaactatcaaggagatgggttaccaa
cgcttgactcagatacaagcaaaatcaattccgatattgatggagggaaaagatgtgctt
ggagccgccaggactggttctggtaaaaccttagcttttcttattccggctgtagagctt
ctttacaatgtcaagttccttcctcgcaatggtactggtgttattgttatctgcccaaca
agagagcttgccattcagtcttatggagtggcgaaagagcttcttaagtatcattcacag
actgtaggaaagcttattggcggtgagaacagaaagaaggaagttgaaattcttgtgaaa
ggtgttaatttattagttgcaacccctggaagacttctcgaccaccttgagaatacaaat
ggttttgtattctcgaatttgaagcttcttgtaatggatgaggctgataggatattggaa
cagaactttgaagaagacatgaagaaaattattgagcttttaccaaagaaaagacagact
tccctgttttccgccacacagactgccaaggttgaggatcttgcaagggtgtcacttaag
tcacctgtttatatcgatgtggatgaaggacgagaggaggttacaaatgaaggcttggag
caaggttattgcgttgtgcctagtgctaagcgattaattttcttactaaccttcttgaag
aggttccttgggaaaaagaaaatcatggtgtttttctctacgtgcaaatcggcaaagttc
catgcggaactctttcgatatatcaaaatagattgccttgtaatccatagagggatagac
cagaacaaaagaacctcaacatttttccaattcataaaggcggaaacgggtattttgttg
tgtactaatgttgcagcccgtggtcttgatattcctcatgtggactggattgtgcagtat
gatcctcctgataaccctaaggaatatattcatagagttggtagaacagctcgtggagaa
ggagcagaagggaaggctctgcttgtcctaaatcaaaaggagttaaagtttattcagtat
ctcaaggaagctaaaattcctgttgaggaacatgaatatgaagaaaagaaattgctgaat
tcgcaaaattttctggagaacttgataactcaaaactatgctttggaagcgtcagcaaaa
gaagcatacaagagttacatttcaggatatgattctcactctatgaaagatgtctttgat
gttcacctcctcgatctcaaagaggttgcggcttcttttggtttctccaatcctcctcga
gtttctctgaagatagatcgaggaacttacaagagtaagagagaaccagttaataagttt
agcagagctggtggcagcagagctcgtggcggcagagccggcggtaaaaagttcgagagg
ttctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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