KEGG   Capsella rubella (pink shepherd's-purse): 17875914
Entry
17875914          CDS       T02984                                 
Name
(RefSeq) uncharacterized protein LOC17875914
  KO
K15255  ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:crb03032]
    17875914
   03029 Mitochondrial biogenesis [BR:crb03029]
    17875914
Enzymes [BR:crb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     17875914
DNA replication proteins [BR:crb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    17875914
Mitochondrial biogenesis [BR:crb03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    17875914
SSDB
Motif
Pfam: DUF223 PIF1 REPA_OB_2 Herpes_Helicase Pif1_2B_dom UvrD_C_2
Other DBs
NCBI-GeneID: 17875914
NCBI-ProteinID: XP_023633352
Position
Unknown
AA seq 477 aa
MILADLEGTLIHATVKKQQVNKFHRMIVSGEWRTFENFQLTKSMGKNRATKHAFKMTFTN
TTVIGRSPILSDDMFLDLADFGSILDDNGLNEKILIDVLGQVVRVGAMKTHDQNGKISKQ
LEIELRDTSDNRFSCTLWGRFAENMWDECEKSEGIPVNCLIRLAKINMFNGQRSISLPND
TLSLSFIQQKPVQPKGEKKVDFYNRVGRKTVSELLEATENMRLCSGNLSLEEAKEIQEFS
EWILAVGDGKISEPNDEEVLIDIPEELLITDADDPIEAISKLVYGDPQIFQKESDPEFFQ
QRAFLCPTNEDVGIINDYMLDQLQGEEEVHLSSDSIDPLKVGCPVMLLRNINARGGLTQL
AEFVIEAIIITGDRVGDKVLIPRILLSPSDTKLMFLMRRRQLPLVVAFAMTINKSQGQSL
SNVGRCLPRPCFSHGQLYVALSRVTSKKGLKVLIVDNDNKPKKKTTNVVFKEVFKKL
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgattcttgcagatctggagggaacactgatccatgcaactgttaagaagcaacaagtg
aataagtttcacagaatgattgtgtcaggagagtggaggacttttgagaattttcagctc
actaaatcaatggggaaaaatagagcaactaaacatgcgttcaagatgaccttcactaac
acgacggtcataggccgctcacctatcctatctgatgacatgtttctcgatttggctgac
tttggaagcatcctcgatgacaatggtctcaatgagaaaattttgattgatgtgttagga
caggtcgtgagagttggagctatgaaaactcatgatcaaaatggcaaaatatcgaaacag
ttggagatagaactcagagacacaagtgataaccgtttttcctgtactttgtgggggaga
tttgctgaaaacatgtgggatgaatgtgaaaagtcagaaggtatcccagttaattgcttg
attcgtcttgcaaagataaacatgttcaacggtcaaagatcaatctccttgccaaatgat
acactatctcttagttttatccagcaaaagcctgttcagcctaaaggagaaaagaaggtg
gatttttacaatcgtgtgggaagaaagactgtttctgaattactagaagctacagagaat
atgaggctttgttctgggaatttgagtttagaggaggcaaaggaaattcaggaattttca
gagtggatactagcagtgggtgatggaaaaatctcagagcctaatgatgaggaggttctt
atagatattccagaggagttactaattactgatgcagatgatcctatagaagcgattagc
aaactagtttatggagatcctcaaatttttcaaaaggagagtgatccagaattctttcaa
caaagagcattcttgtgtcctaccaatgaagacgtgggcattattaacgactacatgctt
gatcaactacaaggtgaagaagaagtacatctcagttcagattctatagatccgttgaag
gttggttgtccagttatgctcttacggaatataaatgctagaggaggcctcacacaattg
gctgagtttgttatagaagcaatcataataacaggagatcgagttggagataaagtgttg
attccacgtatattgttatctccatcagacacaaagcttatgtttttgatgcgtcgaaga
caattgccgttagttgttgcattcgccatgacaattaataaaagccagggacagtctttg
agtaacgttggtcgttgcctccctagaccatgtttttcacatggacagctctacgttgct
ctctcaagagttacttccaaaaagggactgaaggtgctcatcgttgataacgataacaaa
ccaaagaagaaaacaaccaatgtggtattcaaagaagtgttcaagaagctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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