KEGG   Capsella rubella (pink shepherd's-purse): 17879734
Entry
17879734          CDS       T02984                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta
  KO
K11583  serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    17879734
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:crb01009]
    17879734
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crb03019]
    17879734
   03036 Chromosome and associated proteins [BR:crb03036]
    17879734
Protein phosphatases and associated proteins [BR:crb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     17879734
Messenger RNA biogenesis [BR:crb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     17879734
Chromosome and associated proteins [BR:crb03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     17879734
SSDB
Motif
Pfam: EF-hand_13 EF-hand_7 EF-hand_6 EF-hand_1 EF-hand_5 P2R3B_EF-hand DUF4187
Other DBs
NCBI-GeneID: 17879734
NCBI-ProteinID: XP_006282584
UniProt: R0F1K6
Position
Unknown
AA seq 541 aa
MSMVEAIVPGDMACLDVDLLQLQEMSSFVLSSKPGFTQKLFDQWLSLPEAHRQVEALLKD
AIAGAPINVTGSSSGSNSATSNSIPSMFPAGSAPPLSPRSCGSPRTTKQRGPSNLGSTLK
VASEPVKEPMPQFYFQNGRPPPSEIKEQCMFRINHFFYGHMDGLQIQEFKLVTREICKLP
SFFSTSLFRKIDVNNSGFVTREAFIDYWVNGNMLIMDTTTQIFKILKQKDQNFIVKDDFK
PLLKELLATHPGLEFLQTTPEFQERYAETVTYRIFYYINRSGNGRLTFRELRRGNLIDAM
RHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLMRYGNHALTYRIVDRI
FSQVARKFTSKVEGKMGYEDFVYFILAEEDKSSEPSLEFWFKCIDLDANEIITRNEMQFF
YEEQLHRMECMAQEAVLFEDILCQMIDMIGPENESHITLHDLKSSKLSGNVFNILFNLNK
FMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESSLEAP
F
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgagtatggtggaagcgattgttccaggagacatggcttgtttggatgtagatttattg
cagcttcaagagatgtcttcgtttgtactgagttcaaaacctggattcactcagaagctc
tttgaccagtggctttctcttcctgaagctcatcgacaggttgaagcattgctcaaggat
gctatagctggagctcctataaatgtaactggaagttcatctggttcaaattctgccacc
agtaattctataccatctatgtttcctgcgggaagtgcgcctcctctttcgccaaggagt
tgtggttcaccacgtacaacgaaacaaagaggcccttctaacttaggttctacgctgaaa
gtagccagcgagcctgttaaagagccaatgcctcagttctatttccaaaatggccgccca
ccaccaagcgagataaaagagcaatgcatgtttagaattaatcactttttctatggtcac
atggatggactacagatacaagaattcaaattagtcaccagagaaatctgcaagcttcca
tctttcttctccacttcacttttcaggaagatcgatgtcaataattcaggtttcgttact
agagaagcatttatagattattgggtaaacgggaacatgttgataatggatacaacgacc
caaatcttcaagatattaaagcagaaagatcagaattttattgtcaaggatgatttcaaa
ccactacttaaagaactgttggcgacacatcctgggctagagttcctgcaaaccacacct
gaattccaagaaagatatgctgaaactgtcacctacagaatattttactacataaataga
tctggaaatggtcgccttacatttagggagcttagacggggaaacttaattgatgcaatg
cgacatgctgatgaagaagaagatatcaacaaagtgttgagatacttctcgtatgagcat
ttctatgtcatatactgcaagttctgggagctggatacagatcacgatttcttgattgac
aaagaaaatcttatgagatatggaaaccatgcacttacttatcggattgtcgacagaata
ttctcccaggttgctaggaagttcactagcaaagttgaagggaagatggggtatgaggac
tttgtgtatttcatacttgcagaagaagataaatcatcagagcctagcctagaattttgg
tttaagtgcatagacttggatgcaaatgagattattacgcgaaatgagatgcaattcttt
tatgaagagcagttgcatcgaatggagtgcatggcgcaagaggctgttctttttgaggat
atcttatgtcagatgattgatatgatcggaccagagaacgaaagtcatataacgctgcat
gacctgaagagctcaaagctctctggaaacgtcttcaacatcctttttaatctcaacaaa
tttatggcatttgaaacacgggatccgttcctcattcgtcaggagcgtgagaaccctacg
ttgactgagtgggaccgtttcgcacatagagaatatataaggctttcaatggaagaagac
gttgaagatgcatccaatggaagtgctgaggtttgggatgagtcgtcattggaggctccc
ttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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