KEGG   Capsella rubella (pink shepherd's-purse): 17881740
Entry
17881740          CDS       T02984                                 
Name
(RefSeq) lysine-specific demethylase JMJ25 isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:crb03036]
    17881740
Enzymes [BR:crb01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     17881740
Chromosome and associated proteins [BR:crb03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    17881740
SSDB
Motif
Pfam: JmjC zf-4CXXC_R1 Cupin_2
Other DBs
NCBI-GeneID: 17881740
NCBI-ProteinID: XP_023637413
Position
Unknown
AA seq 891 aa
MEERNGKRIRSGDSDELLDDVRSEENDVVSKGPIGRGRGRGRGRGRGRGRGRGRGRGRRK
IDDGEVSFSNQSVQGDMSAPHKDFIKCDGTRKIGGLTCHHCKNLTSETDLIFCSECNKKY
CYDCIKRWYSDRTDEQVRAACPFCMKNCNCRACLRLPLVVKPRTEKDTNVKFKQLQYLLY
KVLPVLKDIYTEQNRELEIETTIRGIPVTESDITRCKLDLSERIYCEHRGVFIITSLICP
SDLCRTSIANFHRSCPNPKCACDICLSCCKELREGFYNQEGINTEYEFGVPVDFSNWKLS
SSGNIPCPPKECGGCGTSTLELRRLCKTDWVKKMITDAEEVTLQFRPSDVNISHECSVCT
INADSTRRQAAFRKNAHDNFLYTPNAVDLTEEDIAHFQSHWMRAEPVIVRNVLEKTSGLS
WEPMVMWRACREIDPKVKCKEEAKSVRALDCLDWCEVEINIHQFFEGYLKGRTHWNGWPE
MLKLKDWPPSTLFEQRLPRHNAEFIAALPFFDYTDPKSGILNLATRLPEKSLKPDLGPKT
YIAYGFPDELGRGDSVTKLHCDISDAVNVLTHTARVEILPHVYDYIKVQQEKYAETKLHK
QYGGQGTEATKLEDQSLIEKNEDKQGFMDKAAKEEQSSSSLRPMGSQRVDQIDVANGDCT
TNERADPMERSSSLNSCTTAMESDHDQKLDVTLTNEFIADENQNDICLETENTSAKSIQE
QKLDASKETDGNTNERSEAVHGGAVWDIFRREDVPKLIQFLKRHQHEFCHTNNEPVNNVI
HAIHDQTMFLSERQKKQLKEEFDIEPWTFEQHLGEAVFIPAGCPHQVRNKQSCIKVALDF
VAPESVEECLRLTHEFRRLPKDHRSSEDKLELKKIALYAASSAIRDAKELM
NT seq 2676 nt   +upstreamnt  +downstreamnt
atggaggaaaggaacgggaagcggattagatcaggagactccgacgagttactcgacgac
gtgagatctgaagagaatgatgttgtctccaaaggcccaatcgggagaggaagaggaaga
ggaaggggaagaggaagagggagagggagagggagagggagaggaaggggaagaagaaaa
attgatgacggagaggtttcattttcaaatcaatctgttcaaggagacatgtctgctccc
cataaggattttattaagtgtgatggaaccagaaagattgggggattgacgtgtcatcat
tgtaagaacttgacgagtgagactgatctcatcttctgttcagagtgtaacaagaagtat
tgctatgactgcatcaagagatggtattcagatagaactgatgaacaagttagagctgct
tgtcccttctgtatgaagaattgcaattgcagagcttgtttacgtttgcctttggttgtc
aagcctcgaactgaaaaagatacaaatgtcaagttcaagcagttgcagtacttactatat
aaagttctcccagttctaaaggatatttatactgagcagaaccgtgaactagagattgaa
acaacaattagaggaatccctgttacagaatctgatattactaggtgcaaacttgatcta
agtgaacgcatttactgtgagcacagaggtgttttcatcattaccagtctcatatgcccg
agtgatctctgccgcacatcaattgccaattttcatagaagctgcccgaacccaaaatgt
gcatgtgatatatgtctttcttgctgcaaggaactaagagagggattctataatcaagag
ggaataaatactgaatatgaatttggagttccagtggatttctctaactggaagcttagt
tcaagcggaaacattccatgccctccgaaagagtgtggtggttgtggtacttcaacactt
gagttgagacgcttatgcaaaactgactgggttaaaaaaatgataacagatgcagaggaa
gttactctgcagtttaggccatcggatgtgaatatttctcatgaatgctccgtatgcact
attaatgctgattctactagaaggcaggcggcgtttaggaagaatgctcatgataacttc
ttatacacaccaaatgctgttgatctaactgaagaggatattgctcattttcagtcgcac
tggatgagggcagaacctgtgatagtcagaaatgttctcgagaagacatctggactaagt
tgggaaccgatggttatgtggagggcttgtagggaaatagatccaaaggttaaatgtaaa
gaggaggcgaaaagcgtgagagctttggattgcttggactggtgtgaggttgaaataaat
attcatcagttttttgaaggctacttaaaaggccgcacacattggaacggttggccagaa
atgttgaaattaaaggattggcctccatcaactttatttgaacagcgccttccaaggcac
aatgctgagtttattgctgcattgcccttttttgattacactgacccaaaatctggtatc
ctaaatctcgctacaagacttccagaaaaatccttgaagccagatcttggacccaagaca
tacattgcatatggtttccctgatgagcttggtagaggagattcagtgacaaagctacat
tgtgatatttctgacgcggtcaacgtgctgacacacacagctagagtggaaatacttcct
catgtatacgactacataaaagtacagcaggaaaaatatgcagaaaccaagttgcataaa
caatatggtggtcaagggacagaagctaccaaacttgaagaccaatcactgatagaaaaa
aatgaagataaacagggttttatggacaaggcagctaaagaagaacaatcaagtagcagt
ttaagaccgatgggctcccaaagagttgatcaaatagatgttgcaaatggtgactgtact
accaacgaaagagctgatccgatggaaaggtcttctagtttaaattcttgcactactgcg
atggagtcagatcatgatcagaaactggatgtaacgctgacaaacgaatttattgctgat
gagaatcaaaatgacatctgtttggagactgagaatacaagtgctaaatccatacaagag
cagaaactggatgcttcaaaagaaactgatggcaataccaatgagaggtcagaggctgtg
catggtggtgctgtctgggatatctttcgaagggaggatgttccaaaacttatccagttt
ttgaaaaggcaccagcatgagttttgtcacaccaataatgaaccagtgaacaacgtgatt
cacgcaattcatgaccagactatgttcctgagtgaaagacagaagaaacagctaaaggaa
gaatttgatatagaaccatggacctttgagcaacacctaggcgaagctgttttcatacct
gcaggttgtcctcaccaagtgagaaataaacagtcttgcataaaggtggcattagacttt
gtggctcctgaaagcgttgaagaatgccttaggctaacacatgagttccgaagattacca
aaagaccacagatctagcgaagataagttggagcttaagaaaatagcgctttatgctgcg
agctcagccataagagatgcaaaagagctgatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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