KEGG   Capsella rubella (pink shepherd's-purse): 17885410
Entry
17885410          CDS       T02984                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03020  RNA polymerase
crb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    17885410
  09124 Replication and repair
   03420 Nucleotide excision repair
    17885410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crb03021]
    17885410
   03400 DNA repair and recombination proteins [BR:crb03400]
    17885410
Transcription machinery [BR:crb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     17885410
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      17885410
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L Tup_N
Other DBs
NCBI-GeneID: 17885410
NCBI-ProteinID: XP_006292069
UniProt: R0FQX6
Position
Unknown
AA seq 116 aa
MNAPDRYERFVVPEGTKKVSYDRDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG
YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFSNQY
NT seq 351 nt   +upstreamnt  +downstreamnt
atgaatgctcccgaccgatacgagagattcgtcgtccctgaaggaaccaagaaggtttct
tatgatagggacacgaagatcatcaatgctgcttcgttcacgattgagagagaagaccat
acgattggaaacattgtccgcatgcaacttcaccgcgacgagaatgtcttgtttgctgga
taccagctgcctcatcctcttaagtacaaaattatagtgaggattcatacaacaagccag
tcttccccgatgcaagcatacaaccaggccatcaatgatctcgacaaggagctcgactat
ttgaagaaccagtttgaggcagaggtagccaagttttcaaatcagtactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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