KEGG   Capsella rubella (pink shepherd's-purse): 17886605
Entry
17886605          CDS       T02984                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g01740 isoform X1
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:crb03016]
    17886605
   03029 Mitochondrial biogenesis [BR:crb03029]
    17886605
Transfer RNA biogenesis [BR:crb03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    17886605
Mitochondrial biogenesis [BR:crb03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    17886605
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR PPR_3 PPR_long MRP-S27 ATP13 TPR_19 EHMT1-2_CRR
Other DBs
NCBI-GeneID: 17886605
NCBI-ProteinID: XP_023638523
Position
Unknown
AA seq 559 aa
MVKEALQFISRLRSSSNFPAQVTCNKHIHQLVNANCGVLCLKLLAYLVSRGYTPHRSSFN
SVVSFVCRLGQVQFAQDIVLSMPRFGCLPDVISYNSLIDGHCRNGDIRSASLVLESLRAS
HGFLYKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKSCSPNVVTYTTWIDTFCKSGELQ
LAMKSFNCMKREALSPNVVTFTCLIDGYCKAGDLEVAVSLYEEMRRVRMSLNVVTYTALV
DGFCKQGKMQRAEEMYSQMLKDRVEPNSLVYTTIIDGYFQKGDSDNAMKFLAKMLNQGMR
LDIAAYGVIISGLCSNGKLKEATEIVQDMEKGGLVPDMMIFTTMMNAYFKSGRMKAAVNM
YHKLVEGGFEPDAVALSTMIDGIAKNGQLHEAITYFSIEKANDVMYTVLIDALCKEGDFI
EVERLLGKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLLTYTTLI
YGLASKGLMVEARQVFDEMLRSGICPDLAVFDLLIRAYKKEGNMTAASDLLLDMQTRGLA
TAVSDGDCSKQCDNEVSCS
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggtcaaagaagctcttcaatttatttctcggctgagaagttcctcaaattttccagcc
caagtcacctgcaacaagcatattcatcagctagtcaatgccaactgcggcgttctctgt
cttaaactcttagcttacttagtctccagaggctacactcctcatcgttcctcattcaat
tcggtcgtatcgtttgtttgtagattaggtcaggttcaattcgctcaagatatcgtactt
tcgatgcctagattcgggtgtttaccagatgttatatcttataactctctcattgatggc
cactgtagaaatggcgatatcagaagtgcttctttggtgttagagagtttaagagcctct
catgggtttctctacaagcctgacatagttagttttaattctctgtttaatgggtttagc
aagatgaagatgttagatgaggtttttgtgtatatgggtgttatgttgaagtcttgttcc
ccgaatgttgttacttatactacttggattgacacgttctgcaaatccggggagttacaa
ttggcgatgaagagttttaactgtatgaagagagaggctttatctccaaatgtggttact
ttcacttgtttgattgacggctattgtaaagctggtgacttggaggttgcggtttcgtta
tacgaagaaatgagacgtgttcggatgtctttgaatgttgttacttatactgctttggta
gatggtttctgtaaacaagggaaaatgcagagagctgaggaaatgtattcgcagatgctc
aaggatagagttgagccaaactctcttgtatacactacgattatcgatgggtatttccag
aaaggagattcggataatgccatgaagtttctggccaaaatgctcaatcaagggatgaga
cttgatattgcagcttatggcgtaatcatatcaggcctttgtagtaatggtaaactaaag
gaggcaacagagattgtacaagatatggagaaaggtggtttagttcctgatatgatgatt
tttactacaatgatgaatgcatattttaaatccgggcgcatgaaggctgcggttaacatg
taccacaaattagttgagggaggctttgagccagatgctgtagctctttcaactatgatc
gatgggattgcgaagaatggacaactacatgaagctataacttatttctctatagagaaa
gctaatgatgttatgtacaccgtgcttattgatgctttgtgcaaagaaggagactttata
gaagttgagagattgcttggcaaaatttcagaggctggacttgttccggataagttcatg
tacacttcttggatagctggtttgtgtaagcaagggaacttggtggatgcgtttaagtta
aaaaccaaaatggttcaagagggtctcgagctcgatttgttaacctacacaacattgatt
tatgggttagctagcaagggtttgatggtcgaggctagacaagtttttgatgaaatgttg
agaagtggaatatgtcctgatttggctgtttttgatctactgattagagcttataaaaag
gagggaaacatgactgctgcttcggatttgcttctcgatatgcaaacaagagggcttgca
acagcagtaagtgatggagattgcagcaaacaatgtgacaatgaagtgagctgttcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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