KEGG   Capsella rubella (pink shepherd's-purse): 17891189
Entry
17891189          CDS       T02984                                 
Name
(RefSeq) autophagy-related protein 8h
  KO
K08341  GABA(A) receptor-associated protein
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:crb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    17891189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crb04131]
    17891189
   04121 Ubiquitin system [BR:crb04121]
    17891189
   03029 Mitochondrial biogenesis [BR:crb03029]
    17891189
Membrane trafficking [BR:crb04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    17891189
Ubiquitin system [BR:crb04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   17891189
Mitochondrial biogenesis [BR:crb03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    17891189
SSDB
Motif
Pfam: ATG8 APG12 ATG5_UblB
Other DBs
NCBI-GeneID: 17891189
NCBI-ProteinID: XP_006298681
UniProt: R0HP96
Position
Unknown
AA seq 119 aa
MGIVVKSFKDQFSSEERLKESKNIIAKYPDRVPVIIEKYSNADLPDMEKNKYLVPRDMTV
GHFIHMLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFMYMCYSTEKTFG
NT seq 360 nt   +upstreamnt  +downstreamnt
atggggattgttgtcaagtctttcaaggatcaattctcctctgaggagcgattgaaagaa
tcgaagaacatcattgcgaaatatccagacagagttccggtgatcattgagaagtattcg
aacgcagatctcccagacatggagaagaacaaatacttggtccctcgagacatgactgtt
ggacatttcatccatatgttaagcaaaaggatgcagttagatccatcaaaggctctcttc
gttttcgtacacaacactcttcctcaaaccgctagtcgcatggactctctgtacaataca
ttcaaggaagaagatgggttcatgtacatgtgttacagcaccgagaaaactttcggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system