KEGG   Capsella rubella (pink shepherd's-purse): 17892090
Entry
17892090          CDS       T02984                                 
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    17892090
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:crb01007]
    17892090
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:crb03016]
    17892090
Enzymes [BR:crb01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     17892090
Amino acid related enzymes [BR:crb01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   17892090
Transfer RNA biogenesis [BR:crb03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    17892090
 Prokaryotic type
   Other AARSs
    17892090
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-GeneID: 17892090
NCBI-ProteinID: XP_006297206
UniProt: R0HK90
Position
Unknown
AA seq 626 aa
MEGSADQTTKALSELAIDSSTTSNAAADPAAADAAEPRSKNALKKELKLKQKEEERKRKE
EEKAKQAPKPSSQSQKSVAADDEEMDPTQYFENRLKYIAAEKAKGENPYPHKFSVSMSIP
EYIEKYGSLNDGDHIEDAEVSLAGRIMSKRSSSTKLFFYDLHGDDFKVQVMADARKSGLD
EAEFYKLHSNVKRGDIVGVTGFPGKTKRGELSIFPRSFILLSHCLHMMPRKADNVNAKKP
ESWVPGETRNPEAYVLKDQESRYRQRYLDLMLNVEVRQIFKTRASIISYIRRFLDNKKFL
EVETPMMNMIAGGAAARPFVTHHNDLDMRLYMRIAPELFLKQLIVGGLERVYEIGKQFRN
EGIDLTHNPEFTTCEFYMAFADYNDLMKMTEDMVSGMVKELTGGYKIKYHANGYDKDPIE
IDFTPPFRRIEMIGELEKVANLNIPKDLTSEEANKYLVDACARFDVKCPPPQTTTRLLDK
LVGEFLEVTCVNPTFIINHPEIMSPLAKWHRSNNVLTERFELFINKHELCNAYTELNDPV
VQRQRFADQLKDRQSGDDEAMALDETFCNALEYGLAPTGGWGLGIDRLTMLFTDSQNIKE
VILFPAMRPPQDESAAAKAPSQTEKN
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggaaggttcggctgatcaaaccacgaaagctttatctgaactagccatagattcttct
accacctcgaatgctgctgctgaccctgccgctgctgatgctgctgaacctcggagtaaa
aatgctctgaagaaggaactgaaattgaagcagaaagaggaagagaggaaacgcaaggaa
gaagaaaaggcaaaacaagctcccaagccaagctcccagagccagaagtcagtggcagca
gatgatgaggagatggatccaacgcaatactttgagaacagattgaagtatattgcggct
gagaaggctaaaggagagaatccataccctcataagttttctgtgtcaatgtcaattcct
gagtacattgagaagtatggtagtttgaacgatggggatcatattgaagatgctgaagtt
tctctggctggccggataatgagcaagcgatcttcctctaccaagcttttcttctatgat
ctacacggtgatgatttcaaggttcaagttatggctgatgcaaggaagtcaggattggat
gaagctgagttttataaactccattcgaatgttaagcgtggtgatattgttggagtcact
ggatttccaggaaaaacaaagaggggagaattgagtatcttcccccgatcatttattctt
ctgtcccattgcctccacatgatgccgagaaaggctgataatgtgaatgcaaagaaacct
gaaagctgggttccaggggaaacgagaaatcctgaagcatatgtcctgaaagatcaggaa
tcaagatatcgccagcgttatcttgatctcatgttgaacgtggaggttcgtcagatattc
aagaccagagctagtatcatctcctacatccgtagattcctcgacaataaaaagttcttg
gaggtcgagacacctatgatgaacatgattgctggtggagctgctgcgagaccatttgtg
acacatcacaatgatttagatatgaggctgtacatgcgtatcgcacctgaactctttctt
aagcaactcattgttggtggactggaacgtgtttatgagataggaaagcaattcagaaac
gagggtattgacttgacccataatccggagttcaccacttgcgagttctatatggctttc
gcagactacaatgacctgatgaaaatgactgaggatatggtcagtggaatggtcaaggaa
ttaacaggtggttataaaatcaagtatcatgctaatgggtatgataaggatccaattgaa
atcgacttcactcctccgttcaggagaattgagatgataggagagttagagaaggtggct
aacctgaatataccaaaagacttgactagcgaagaagccaacaagtatctggttgatgca
tgtgcgaggtttgatgtcaaatgccctcctcctcaaacaacaactcgtctgttagataaa
cttgttggtgaatttctggaagtgacatgtgtgaacccaactttcatcatcaaccatccc
gagatcatgagtccattggcaaaatggcacagatcgaacaatgttttgacagagagattc
gagctgttcatcaacaaacatgaactatgcaacgcctacacggagctgaatgatcctgtg
gtacagcgccagcgttttgctgatcagctgaaggaccgacaatctggagacgatgaagcg
atggctttagatgagacattttgtaatgctttagaatacggattggctcctacaggtggt
tggggattgggaatcgacagactgactatgctctttactgactcacagaacatcaaggaa
gttattctcttcccggcgatgaggccaccacaggacgagtcagcagccgccaaagctcct
tcacaaacagagaagaactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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