KEGG   Capsella rubella (pink shepherd's-purse): 17894665
Entry
17894665          CDS       T02984                                 
Name
(RefSeq) tRNase Z TRZ1
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:crb03016]
    17894665
Enzymes [BR:crb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     17894665
Transfer RNA biogenesis [BR:crb03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    17894665
 Prokaryotic type
    17894665
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B PDEase_II
Other DBs
NCBI-GeneID: 17894665
NCBI-ProteinID: XP_006302656
UniProt: R0I067
Position
Unknown
AA seq 280 aa
MEKKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI
GGLPMYVATRGLYKMKPPTIIVPKSIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFII
RKDLKVKAFKTYHVIQSQGYVVYSTKHKLKQEYIGLSGNEIKNLKASGVEITNSITTPEV
AFTGDTTSDFVVDENNDDALKAKVLVMESTFLDDSVSVEHARDYGHIHLSEIVNHAEKFQ
NKAILLIHFSARYTVKEIEDAVSALPPPLEGRVFALTQGF
NT seq 843 nt   +upstreamnt  +downstreamnt
atggagaagaagaaggcaatgcaaatcgaagggtaccctatcgagggattatcgattgga
gggcacgagacgtgtatcatattcccatctcttcggatagctttcgacattggtcgttgc
ccacatcgcgcaatttcacaggacttcctcttcatctctcattctcacatggatcatatc
ggtggattgccaatgtatgttgcaactagaggcttgtacaaaatgaagcctccaacgatt
atagtgcccaaatcgattaaagaaactgtcgagagtttgtttgaggttcacagaaagtta
gattcttcagagctaaagcacaatcttgttggcttggacataggggaggagtttattatt
aggaaagatctcaaagttaaagcctttaagacataccatgtcatccaaagccagggttat
gtagtgtattcaactaaacataaactaaagcaggagtatattggcctatctgggaatgaa
attaagaacttgaaggcttcaggtgttgagataacaaacagcataacaactcctgaagtc
gcttttacgggagatacaacatcggattttgtagttgatgaaaataatgatgatgctctc
aaggcaaaggttctcgtcatggagagcacatttcttgatgattccgtatccgtagagcat
gcaagggattatggacatatccatttatctgagatagtaaatcatgctgaaaagtttcaa
aacaaagcaatcctactgatccacttttcggctcggtatacagtgaaggaaatcgaagat
gcggtttctgcattgcctccacctctagagggacgtgtgtttgcactaacacaaggattc
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system