KEGG   Capsella rubella (pink shepherd's-purse): 17895408
Entry
17895408          CDS       T02984                                 
Name
(RefSeq) nuclear pore complex protein NUP96
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    17895408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crb03019]
    17895408
   03036 Chromosome and associated proteins [BR:crb03036]
    17895408
Messenger RNA biogenesis [BR:crb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     17895408
Chromosome and associated proteins [BR:crb03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    17895408
SSDB
Motif
Pfam: Nup96 Nucleoporin2
Other DBs
NCBI-GeneID: 17895408
NCBI-ProteinID: XP_006300673
UniProt: R0GD94
Position
Unknown
AA seq 1046 aa
MTSLTIQPIPDISWMAGNLDSRKKRRISLDGVTALSEHSKEIIDSLPMLNSPDYFLKPCM
NELIEREIENPDYCSRVPDFTIGRIGYGYIKFLGNTDVRRLDLDQIVKFQRHEVIVYDDE
SSKPVVGEGLNKVAEVTLIVNIPNLTLGNEQVDHIAYKLKQSTERQGATFISFDPDKGLW
KFLVPHFSRFGLSDDEAEDIAMTDAPGLGDPVGQEGDKVADINEEHQMETSQPELSHSLP
AHLGLDPGKMKEMRMLMFPNEDLDESDDFGEQTSHHMASLTKQNVRPSQRISQRNSHQDT
PPVLRKTPLALLEYNPVNDKSSPGSILMVQQNKNLAVRKSKMRGFELDISHGTPLSDNYS
RNVVDAALFMGRSFRAGWGPNGVLFHTGKPICSSSSQMVLSSVINKERIAIDKVVWDRKE
EVQKELIDFAFEAPLNLHKKLDHLEEEVEFGSFSLKLQRVVTDRVVLSGICRSYIDIIEK
QLEVAGLSTSAKLFLMHQVMVWELIKVLFSERQSTERLNYAASDNEEDMMQDLKEDSAEV
DTEALPVIRRAEFSYWLQESVSPRVQEDVSGLNGSGYLDHLFFLLTGRELDSAVELAISK
GDVRLACLLSQAGGSTVNRNDILQQLHLWRRNGLDFNYIEKGRIKLYELLAGNIHDALQD
FTIDWKRFLGLLMWHHLPPDSSLPVIFRNYQLLLDQEKAPWPVPIYIDEGPADGFVSNDK
HSDLLYYLMLLHSKEEEEVGFLKTMFSAFSSTDDPLDYHMIWHHRGILEAVGAFTSDDLH
TLDMGFIAQLLSQGLCHWAIYVVLHIPFREDQPYLHVNVIREILFQFCETWSSMESQRKF
IKDLGIPSEWMHEALAVYYNYHGDFIKALDHFIECANWQRAHFIFMTSVAHSLFLSANHS
EIWRIATSMDDRKSEIENWDLGAGIYMAFYLLKSSLQEDADTMVELEPLESTNESCRSFV
GRLNESLAVWGDRLPVEARVAYSKMAEEICELLLSDLSKDPSRETQLSCFETAFNAPLQE
DVRSTHLQDAVSLFSLYLSEGGQISA
NT seq 3141 nt   +upstreamnt  +downstreamnt
atgacgtctcttactattcaaccaattccagatatttcatggatggctggaaatttggac
tcgcgaaagaaaagaaggatctccttagatggagttactgccttgagtgaacattccaaa
gagatcattgattcattgcctatgttaaattcacctgactacttcttgaagccatgcatg
aatgagttgattgagcgagaaattgaaaaccctgattattgcagcagggttcctgatttc
acaattggtaggattggttacggttatattaagtttcttgggaatacagatgttagaagg
ttagacctggatcagatagttaagtttcaaaggcacgaggtgattgtttatgatgatgag
agctctaagccagttgttggcgagggacttaataaggttgctgaggtgactctgattgta
aacataccaaatcttactttggggaatgaacaagttgaccatattgcttataaattaaaa
cagagcactgaaagacaaggggcaactttcatctcatttgatcctgataaaggtttatgg
aagtttttggttcctcatttcagcagatttgggttgagtgatgatgaggcagaagatatt
gctatgactgatgccccaggtttgggagatcccgtagggcaggagggtgacaaggtagct
gacattaatgaagaacatcagatggaaacttcccagccagaactttctcactctcttcct
gctcatctaggacttgatcctggaaagatgaaagaaatgagaatgctgatgtttcctaat
gaagatctagacgaaagtgatgattttggagagcaaacttcccatcatatggcatccttg
actaaacaaaatgtaagaccttcacagagaatttctcaaagaaatagtcatcaagatact
ccaccggtcttgaggaaaactccacttgctttgctagagtataaccctgttaatgataaa
agctccccaggtagtatcttgatggtccaacaaaataagaatctggcggtgagaaagtcg
aaaatgagaggtttcgagctagacatcagccatggcacaccattatctgataactattct
cgcaatgttgtggatgcagcattatttatgggaagatctttccgagcaggttggggacca
aatggtgtcctttttcacactggtaagccaatatgtagctccagttcccagatggtattg
tcttctgtgatcaataaagaaaggatagcaattgacaaagtggtttgggatagaaaggaa
gaagttcagaaagaacttattgattttgcattcgaggctcccttaaatctccacaagaaa
ttggatcatctagaagaagaagttgagtttggctctttcagtcttaaacttcagagagtg
gtcactgatcgtgtagttctttctggtatctgccgaagttatattgatataattgagaaa
cagctagaggttgctgggttgtcaacatctgcaaagctgtttttgatgcaccaagtcatg
gtgtgggaactcataaaagttctcttttctgagagacagagtactgaacgtttgaattat
gcagcttctgataatgaggaagacatgatgcaggatttgaaggaagattctgcagaagtt
gatacagaagctcttccagttatccgaagagcagaattcagttattggctccaagaaagt
gtcagtccgcgtgtacaagaagatgtgagtggtctaaatggttctggctatcttgatcac
ttattctttcttctaactggacgagaacttgattcagcagtagagcttgccatatctaag
ggagatgttagacttgcatgtttgttaagccaggctggtggatcaactgtaaaccgcaat
gatatcttgcagcagcttcacctttggagaaggaatgggctggattttaattacatcgag
aaggggagaattaagctttacgaattgcttgctggtaatatccatgatgcgttacaagat
tttacaattgactggaagagattcctagggttgttaatgtggcatcatctgcctcccgac
agttcattacctgtcatcttcagaaattatcaactcctactagatcaggaaaaagctcca
tggcccgttccaatatatattgacgaaggacctgcagatgggtttgtaagcaacgacaag
cattctgaccttttgtattatcttatgcttctgcacagcaaagaagaggaagaagttggt
ttcctgaagactatgttcagtgccttctcttcaactgacgatccacttgactatcatatg
atctggcaccatcgaggaatcctagaagctgttggggcattcacttcagatgatcttcac
actctcgatatgggatttattgcacagcttctctctcagggtctttgtcattgggctatc
tacgttgttctgcacatacccttccgtgaagatcaaccatatctacacgtcaatgtcatt
cgggaaatcctgttccagttctgtgaaacttggagttctatggaatcacaacggaaattt
atcaaggacttgggtatcccttctgaatggatgcatgaagctctggcagtttattacaat
taccatggagatttcataaaggctcttgaccactttattgaatgtgcaaactggcaaaga
gctcatttcatttttatgacgtcagttgcccattcattatttttgtcagcgaaccattca
gaaatatggagaattgccacttcaatggatgatcgcaaatctgagattgaaaactgggat
ttgggtgccgggatttacatggcattttatttacttaagagttcactgcaagaagatgct
gatacgatggtcgaactggaaccccttgagagcacaaacgagtcgtgcagaagtttcgtc
ggtcgtttaaacgaatcattggctgtttggggtgacagattaccagttgaagctagagtg
gcatattcaaagatggcagaggaaatatgcgagttgctactgtcagatctgagtaaggat
ccaagtcgagagactcagctaagctgttttgagacagccttcaatgccccattacaagaa
gatgtgagatcaacacatctgcaagatgctgtgtcactattctctctatatctttcagaa
ggcggccaaatctcagcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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