KEGG   Capsella rubella (pink shepherd's-purse): 17896703
Entry
17896703          CDS       T02984                                 
Name
(RefSeq) diaminopimelate decarboxylase 2, chloroplastic
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb00300  Lysine biosynthesis
crb00470  D-Amino acid metabolism
crb01100  Metabolic pathways
crb01110  Biosynthesis of secondary metabolites
crb01230  Biosynthesis of amino acids
Module
crb_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:crb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    17896703
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    17896703
Enzymes [BR:crb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     17896703
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-GeneID: 17896703
NCBI-ProteinID: XP_006303986
UniProt: R0I3P4
Position
Unknown
AA seq 491 aa
MAEATQFLSKPSYLRGTLNQYQLNQTTRSRIPVLSLKSTSKPLKRFSVKAAVSQNSTKTL
TSAPSSSSSFDHCFKKSSDGFLYCEGTKVHDIMESVERRPFYLYSKPQITRNLEAYKEAL
EGVRSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLL
EDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNS
KFGIRNEKLQWFLDEVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMVEYIDEIRRQG
FEVSYLNIGGGLGIDYYHAGAILPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFV
NHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPEAEVTKFDVVGPVCES
ADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSITKIRHAET
FDDHLRFFEGL
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggcggaagctactcaatttctctcaaaaccttcatatctccgtggaacactaaatcaa
taccaattgaaccaaaccacacgctccagaatcccagttttgtctcttaaatcgacctcg
aagccactcaaacgcttctccgtcaaagccgctgtttcccaaaactccaccaaaaccctc
acttctgcgccgtcgtcgtcgtcgtcgttcgatcactgtttcaagaaatcatcagatggg
ttcctctattgcgaaggaactaaggttcacgacattatggagtcagtcgagagaagacct
ttttacttatacagtaaacctcagatcacgagaaacctagaggcgtataaagaggcattg
gaaggagtgagatctgtcattggttacgctatcaaagctaataataatctcaagattttg
gagcatttgaggagtttaggctgtggtgctgtgctcgttagtggaaatgagctcagactt
gctcttcgtgctggtttcgatcctacaaagtgcatttttaatggaaatgggaagttgttg
gaagatttagttctagctgctcaagaaggtgttttcgtaaatgtcgatagtgagtttgac
ttgaataacattgtggaagcttcaagaatttctggcaagcaggtcaatgtactgctgcgt
atcaatcctgatgttgatcctcaggtgcatccatatgtagctactgggaacaagaactca
aagtttggtatcaggaacgagaagcttcaatggtttctggatgaggtgaaggcacacccc
aaggagctgaagcttgttggagctcattgccatctaggctctaccattacaaaggtggat
atattcagagatgctgcagttctcatggtggaatacatcgatgagatccggcgtcaaggt
tttgaagtcagttacttgaacattggtggtggtttagggatagactattaccatgctggt
gctatcctacctacacctatggatctcatcaacactgtaagggagcttgttctttcacga
gacctgaatttgataatcgagccagggaggtcgctaattgcaaacacgtgctgtttcgtc
aaccatgtaactggtgtgaaaacaaatggaactaaaaacttcatagtgattgatggaagt
atggctgagcttatccgtcccagtctttatgatgcttatcagcacattgagttggtctct
cctacaccgcctgaagcagaggttaccaaattcgacgtagttggtcctgtttgtgaatct
gctgacttcttgggcaaagacagagagcttcccactcctccacagggagctggtcttgtg
gttcatgacgctggtgcatattgtatgagcatggcctccacttacaatctcaagatgcgt
cctccggaatactgggttgaagaagatgggtcgatcactaagataaggcatgctgagaca
ttcgatgaccatttgcgtttctttgaaggtctatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (5)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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