KEGG   Capsella rubella (pink shepherd's-purse): 17897262
Entry
17897262          CDS       T02984                                 
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crb03400]
    17897262
Enzymes [BR:crb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     17897262
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    17897262
 Prokaryotic type
    17897262
SSDB
Motif
Pfam: DNA_photolyase FAD_binding_7
Other DBs
NCBI-GeneID: 17897262
NCBI-ProteinID: XP_023644848
Position
Unknown
AA seq 494 aa
MSSSISVQTGRIRVLKKGSWQPSDQMVGPVVYWMFRDQRLRDNWALIHAVDLANRTNAPV
AVVFNLFDQFLGAKARQLGFMLKGLRQLHRQIDSLQIPFFLLQGDAKETIPNFIAECGAS
HLVTDFSPLREIRSCKDEVVKRTSDSLAIHEVDAHNVVPMWAASGKLEYSARTIRGKINK
LLPDYLIEFPKLEPINKKWAGIVDKVDWDSLIERVVREGAEVPEIEWCMPGEDAGMDVLM
GTKDGFLTKRLKNYSTDRNNPVKPKALSGLSPYLHFGQISAQRCALEARKVRNTSPQAVD
TFLEEMIVRRELSDNFCYYQPHYDSLKGAWEWARKSLMDHASDKREHIYSLEQLEKGQTA
DPLWNASQLEMVHQGKMHGFMRMYWAKKILEWTKGPEEALSISIYLNNKYEIDGRDPSGY
VGCMWSICGVHDQGWKERPVFGKIRYMNYAGCKRKFNVDSYVSYVKSLVSVTKKKRKAEE
QLTRDSINPEINNV
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgtcgtcgtcaatctctgttcaaacgggtcggatccgggtcctaaagaaaggctcatgg
caaccgtcggatcaaatggtaggtcctgtcgtttactggatgttcagagatcaacggttg
agagataactgggcgttgatccacgccgttgatttggcgaacagaaccaacgcgccggtg
gccgtcgtgttcaatttgttcgatcaatttctgggcgcaaaagcgaggcaattagggttt
atgttaaagggtttgcgccagcttcatcgccagatcgattctcttcaaattccgtttttt
ctattacagggagatgcaaaggagacaattcctaatttcattgcagaatgtggagcttca
catttggttactgatttctcgcctttacgagaaatcaggagttgtaaagatgaagttgtt
aagagaaccagtgattcattggctatacatgaggttgatgctcacaatgtagttccaatg
tgggctgcttccggtaaattggagtatagtgctagaacaatacggggtaagatcaacaaa
ctactacctgattacctcattgagtttcctaaactcgaacctataaataagaagtgggct
gggatagtggataaggtggattgggacagtctcatcgaaagagttgtaagggagggtgca
gaagttcctgagattgaatggtgtatgccgggagaagatgcggggatggatgtattgatg
gggactaaagatgggttcttgacgaaaaggttgaagaattattcaacagaccggaataac
cctgttaagccaaaagcactctctggtctctctccttatcttcatttcgggcagatatca
gctcagcgatgtgccttagaggcacgtaaagtccggaatacctcccctcaggcggttgac
acatttttggaagaaatgattgtgcgaagagaactttccgacaatttttgctactatcag
cctcattatgattctttgaagggagcttgggagtgggcacgcaagtcattaatggatcat
gcttctgataagagagaacacatttactcgttggaacagttggagaagggacagacagca
gatcctttatggaatgcttcacagttagagatggttcatcaagggaaaatgcacggtttc
atgagaatgtattgggcaaagaagattctagaatggaccaagggacctgaagaggctctc
tccatatccatctatctaaataacaagtatgagatcgatggtcgtgacccgagtggatat
gttgggtgtatgtggtccatatgcggtgttcatgatcaggggtggaaagagaggccagtt
tttgggaagatacggtacatgaactacgcaggctgcaaacggaaattcaatgtggacagt
tacgtctcttatgtcaagagtttggtgtcagtaacaaagaagaagaggaaagctgaagaa
cagcttaccagagactctattaatccggagataaacaatgtttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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