KEGG   Capsella rubella (pink shepherd's-purse): 17897539
Entry
17897539          CDS       T02984                                 
Name
(RefSeq) probable threonine--tRNA ligase, cytoplasmic
  KO
K01868  threonyl-tRNA synthetase [EC:6.1.1.3]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    17897539
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:crb01007]
    17897539
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:crb03016]
    17897539
Enzymes [BR:crb01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.3  threonine---tRNA ligase
     17897539
Amino acid related enzymes [BR:crb01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   17897539
Transfer RNA biogenesis [BR:crb03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    17897539
 Prokaryotic type
    17897539
SSDB
Motif
Pfam: tRNA-synt_2b TGS HGTP_anticodon tRNA_SAD
Other DBs
NCBI-GeneID: 17897539
NCBI-ProteinID: XP_006303165
UniProt: R0IGY0
Position
Unknown
AA seq 664 aa
MANNHPPRDEAYLSSVIPKRIRLFEQIQADHLEQLQSLPHDPIKITLLPDGIVKEGKRWE
TTPMDIAVQISRGLAKSALVSSVNNVLWDMNRPLESDCSLEILGFDSNQGRDTLWHSSAH
ILGQALEQEYGCKLYIGPCKTIYEGFYYDAFYHGDVAINENHFPNIEAGVAKAVEEGQPF
ERIEVTKDQALEMFSDNNFKVEIINEDLAEEETITVYRCGPLVDLCPGPHIPNTSFVKAF
KCLNALSVDWKGNRDRESLRSVYGISFPEDEQLKDFLISREHFICHSLSPGSCFFLPLGT
RVYNKLMGFIKTEYWKRGYTEVISPNIYNMKLWETSSEHAENYKEDMFTFDIDKQEFGLK
PVNCHGHCLMFQNRVRSYRELPIRLADFGALHRNEKREALSGLTCVRRFQQDDAHVFCRE
TQVEEEVKGILDFVDYVYTILGFTYELKLSTRPKKYIGDLEKWDRAEGALEKALKDFGKP
FFVNKGDGAFHGPKVDITVSDAMKRNFQCATLQLDFQLPDCFKLEYSSLAEDETKREKPV
LIHRAVLGSVERMFAILLEQNKGKWPFWLSPRQVIVCSLLKDDRSYAEKVRDQIHQAGYY
DDVDTTDRNISEKVEEAQVARYNYILVVGDEEARRGQVTVWLRDEVMSIETLLDEFKLKT
ANFL
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggcgaataatcatcctcccagggacgaggcttatctctcatccgtcatccccaagcgt
atcaggctcttcgagcaaatccaagccgatcacctcgagcagcttcaatctctcccacac
gatcccatcaagattactcttctcccagatggtatcgtgaaagaagggaagagatgggag
accactccaatggacatcgcagtgcagatttctaggggtttggcaaaatctgccctcgtt
tcttcggttaataatgtcctgtgggacatgaacaggcccctggaaagtgattgttcgctg
gagattttaggatttgacagcaaccaaggccgtgatactctctggcattctagtgctcac
attctcggccaagctctggagcaggaatatggatgtaagctttacattggaccctgcaaa
accatatatgagggtttttattatgatgcattttatcatggcgatgtagccataaacgag
aatcattttccaaacatcgaagcaggtgttgccaaagctgttgaggaaggacagccattt
gaaaggattgaagtgaccaaggatcaggcacttgagatgttctctgataataactttaag
gttgaaatcatcaatgaagacttggccgaagaagagaccattacagtctacagatgtggc
ccattggttgatttgtgtcctggaccgcatataccaaatacttcctttgtgaaagctttc
aagtgtttgaacgcgttatcagttgactggaaaggtaacagagaccgcgaaagcttgcgg
agtgtgtatgggatatcatttccggaagatgagcaacttaaggactttcttatttcacgg
gagcatttcatttgtcactcactcagtcctggaagttgtttcttcctccctcttggcact
cgcgtatacaacaagttgatgggattcattaagacagaatattggaaaaggggatacact
gaggtcatttcaccaaatatttacaacatgaaactctgggaaacatcatcagaacatgct
gaaaactacaaggaagatatgttcactttcgatattgacaaacaagaattcgggctcaaa
cctgtgaattgccatggtcactgcttgatgttccaaaacagagttcgctcatatagagaa
ttgcccattagactggctgactttggagcgctacatcgaaatgagaaacgtgaagctctt
agtggattaacctgtgtccgacggttccaacaggatgatgcacacgtgttctgtagagag
acgcaggtggaagaagaagtgaaaggaatattggattttgttgactatgtttacacaata
cttgggtttacttatgagctgaagctttcaacgcggccaaagaagtacattggagatttg
gaaaaatgggacagagctgaaggagcacttgaaaaagcgcttaaagattttggaaagccg
ttttttgtaaacaaaggagacggtgcatttcatggcccaaaggtcgacataactgtgtct
gatgcaatgaaaaggaatttccagtgtgctactttacagcttgattttcaacttcctgat
tgcttcaaactggaatattcatccttagctgaggatgaaacgaagagggagaaacctgtg
ctgatacatagagcggtgttgggctctgttgagcgaatgtttgccatattgttggaacag
aacaaagggaaatggcccttctggctaagtccgcgccaggtcatagtttgctccttgtta
aaggatgatcgttcctacgcagaaaaggtgagagatcaaattcaccaagctggctactat
gatgatgttgacacaacggatagaaacatcagtgagaaggtggaagaagcccaagttgca
cggtacaactacatattggtcgtgggtgatgaagaggctagaaggggacaggtgactgtt
tggctaagagacgaagtgatgagcattgagactctcttggatgaattcaagctcaaaact
gccaactttctctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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