KEGG T02984: 17898544

Capsella rubella (pink shepherd's-purse): 17898544

Entry

17898544          CDS       T02984

Name

(RefSeq) myosin-5 isoform X1

K10357

myosin V

Organism

crb Capsella rubella (pink shepherd's-purse)

Pathway

crb04814

Motor proteins

Brite

KEGG Orthology (KO) [BR:crb00001]
09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    17898544
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crb03019]
    17898544
   04131 Membrane trafficking [BR:crb04131]
    17898544
   03029 Mitochondrial biogenesis [BR:crb03029]
    17898544
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:crb04812]
    17898544
Messenger RNA biogenesis [BR:crb03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     17898544
   mRNA cycle factors
    P-body specific factors
     17898544
Membrane trafficking [BR:crb04131]
Others
  Actin-binding proteins
   Myosins
    17898544
Mitochondrial biogenesis [BR:crb03029]
Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    17898544
Cytoskeleton proteins [BR:crb04812]
Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     17898544

SSDB

Motif

Pfam:

Myosin_head DIL IQ Myosin_N nSTAND3 AAA_16 DUF1664 Zeta_toxin Flp1_like TSC22 AAA_22 CCB2_CCB4 RP853

Other DBs

NCBI-GeneID:

17898544

NCBI-ProteinID:

XP_023645043

Position

Unknown

AA seq 1534 aa
MFVFNAMQCSQAAPVITVGSHVWVEDPHLAWIDGQVTRIHGDNIHVKTNQGKTVVTNVYF
PKDTEVPPGGVDDMTKLSYLHEPGVLQNLGTRYELNEIYTYTGNILIAVNPFQRLPHIYE
TDMMEQYKRVALGELSPHVFAIGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYL
AFLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVEIQFDKNGRISGAA
IRTYLLERSRVCQISDPERNYHCFYLLCAAPPEDIEKYQLKNPQSFHYLNQSNCYKLDGI
DDASEYLETRKAMDVVGISNDEQEAIFRVVAAILHLGNINFGKGEAIDSSVVKDEESGRH
LNLAAELLMCDAQSLEDALIRRVMVTPDEIITRTLNPDDAIASRDTLAKTIYSHLFDWIV
NKINTSIGQDPRSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEE
YTKEEIDWSYIEFIDNQDVLDLIEKKPGGIISLLDEACMFPKSKSQDFSQKLFQTFKNHK
RFAKPKLSPTDFTISHYAGEVTYQSDHFIDKNRDYIVAEHQALFTASNCSFVAGLFHSLH
EDSSRSSKFSSIGSRFKQQLHSLMESLNGTEPHYIRCIKPNNVLKPGVFENFNVIHQLRC
GGVLEAIRISCAGYPTRLAFYNFLDRFGLLAPEVLEGNYDDKVACQMILDKKGLRDYQVG
KTKIFLRAGQMAELDARRSEVLGNAARVIQRQFRTCIARKNFRSIRNAAIVLQSFLRGEI
AREVHKKLRIEAAALRFQKNFRRYIDRKSFVTTKSSTIVLQTGLRAMIARSEFRLRRQTN
AAIVLQAHWRGRQAYSYYTRLQKAAIVTQCAWRCRLARRELRMLKMAARETGALKDAKDK
LEKRVEELTWRLQLEKRLRTDLEETKGQEVAKLQETLHTMRLQLKESNEKVVKEQDAARI
AIEEASSVNKEPVVVEDTEKIDSLSNEVDRLKGLLSSETQKADEAKQAYCSTLVQNEELS
KKLEEAGRKIDQLQDSVQRFQEKVFNLESENKVLRQQTLTISPTTRALALRPKTIIIQRT
PEKDAFSNGETTQLQEPETEDRPQKSLNQKQQFSILQENQELLLKSISEDIGFSEGKPVA
ACLIYKCLIHWRSFEVERTSIFNRIIETIASAVEMQENSDVLCYWLSNSATLLMLLQRTL
KASATGSITTPRRRGMPTSLFGRVSQSFRGSPQSAGFPFMNGRVIGGGLDELRQIEAKYP
ALLFKQQLTAFLEKIYGMIRDKMKKEISPLLASCIQALRTKTPRSGLVKGRSQNNFVAQQ
VLIAHWQSIVTCLNGHLRTMRANYVPSLLISKVFGQIFSFINVQLFNSLLLRRECCSFSN
GEYVKTGLAELEKWCHDATEEFVGSAWDELKHIRQAVGFLVIHQKPKKSLKEISTELCPV
LSIQQLYRISTMYWDDKYGTQSVSQEVLASMRHMTSDVTKNTISSSFLLDDDSSIPFSLD
EISKSMQNVEVAEVDPPPLIRQNSNFMFLLERSN

NT seq 4605 nt +upstreamnt +downstreamnt
atgtttgtttttaatgcaatgcaatgttcgcaggctgctccagtcattactgtgggctca
catgtctgggttgaagatccacatttggcatggattgatggacaggttactcgaattcat
ggtgataacattcatgtcaaaactaatcaggggaaaaccgttgtgacgaatgtatatttt
cccaaggatactgaagttccacctggaggtgtagatgacatgacaaaactttcatacttg
catgagcctggagtcttacaaaacctagggacaagatatgaactcaatgaaatctacacc
tatacagggaatatcctaattgcagttaatccattccaaaggctgcctcatatttatgaa
acggatatgatggaacaatataagagagtagcactcggagaactaagtcctcatgttttt
gcaatcggggatgctgcatatagggcgatgattaatgaaggcaaaagtaattcgattttg
gtaagtggcgaaagtggtgctggtaagactgagacgacaaagatgctcatgaggtacctt
gcctttttgggtgggaggtctggtgtagaaggaaggacagttgaacagcaagtcttagag
tccaatccggttcttgaagcatttggcaatgcaaaaactttacgaaacaacaattcaagt
cgttttggtaaatttgttgaaatccaatttgacaagaatggaaggatatctggggcagct
attaggacttatctgctggagagatcccgtgtttgccaaatctcagatcccgaaagaaac
taccattgcttttatcttctttgtgctgctccgccagaggatatagagaagtaccagctg
aaaaacccacagtcattccattatctgaatcagtcaaattgttataaactggatggtatt
gatgatgctagcgaataccttgaaacaagaaaagctatggatgtagttggaatcagtaat
gatgaacaggaggcaatcttcagggtggttgctgcgattcttcatcttggtaacattaat
tttggaaaaggggaagctattgattcctcggtcgtcaaggatgaagaatccggacgtcat
cttaacttggcggcagagctacttatgtgtgacgcccagagcctagaagatgctcttatt
aggcgtgtgatggttacacctgacgagattatcacgagaacccttaatcccgacgatgca
attgctagtcgggataccctggccaagacaatatattctcacttgtttgactggattgtg
aacaaaattaatacttccatcgggcaggacccaaggtcaaagtcaattattggagttttg
gatatctatgggtttgaaagtttcaaatgcaatagttttgagcaattttgcatcaatttc
acgaatgaaaaattgcaacaacattttaatcagcatgttttcaagatggagcaggaagag
tataccaaagaagagatcgattggagttacatagagtttattgataatcaagatgttctc
gatttaattgaaaaaaaaccaggaggaattatttcacttctagatgaagcctgtatgttt
cccaagtctaaatcccaagacttctcccaaaagttgttccagacgttcaaaaatcacaag
agatttgctaaaccaaagctctctcccactgattttaccatatcgcattatgcgggagag
gttacttatcaatcagaccattttatcgataagaacagggattatatagttgctgaacat
caagcactatttactgcatctaattgctcatttgtggcgggtttgtttcattcacttcat
gaagactcatccagatcatcaaaattttcttccattgggtcacggtttaagcaacaactt
cactcgctgatggaatcacttaatggcacagaacctcattacatcagatgtataaagccg
aacaatgttcttaaacctggtgtctttgagaacttcaacgtcattcatcaattacgttgt
gggggtgttcttgaggccattaggatcagttgcgctggctatcctaccaggcttgccttc
tataactttcttgaccgttttggtctccttgctccagaagttttggaaggaaattatgat
gataaagtagcttgccaaatgattcttgataagaaaggtctgagggactaccaggttgga
aagacaaagattttccttcgagctggtcagatggctgaattagatgcgaggagatcagag
gtacttgggaatgctgccagagtcattcagagacaattccgcacatgtattgccagaaag
aatttccgttctattcgcaatgctgctattgttttgcaatccttcctacgaggcgaaatt
gcccgggaagtacacaaaaaactgagaatagaagctgcagctctaagattccagaagaat
ttccgccggtacatcgacaggaagtcttttgtcaccacaaaatcatcgacaattgtgttg
cagactggcttaagggcaatgattgcacgtagtgaattcaggttaagaaggcaaacaaat
gccgccattgtgcttcaggctcattggcgtggtcgtcaagcatactcatattacacaaga
cttcagaaggcggcaatagtcacgcaatgtgcctggagatgcagacttgctagaagagag
cttaggatgctgaaaatggctgcaagagaaaccggtgctcttaaagatgctaaggataaa
ttggaaaagcgggtagaagagcttacctggcgtttacaattggagaagcggttaaggact
gatcttgaggagacaaaggggcaagaagttgcaaagctgcaagagacattgcataccatg
cggttacaattgaaggaatctaatgaaaaggttgtaaaggaacaggacgcggctcgaata
gcaattgaagaagcaagttcagttaataaggaacctgttgttgttgaagatacagagaag
attgattctttgagcaacgaagttgataggctaaagggactgttgtcatcagaaacacag
aaagcagatgaagcaaagcaggcttattgtagtaccttggtccaaaatgaggaattaagt
aagaaacttgaagaagctggaagaaaaatagatcagcttcaagattctgttcagagattc
caagaaaaggtctttaacttggagtcggagaataaagtacttcggcaacaaactcttact
atctcaccgactaccagagctttagctctaagaccaaaaactatcataattcagagaact
cccgagaaagatgctttctccaatggagaaacaacacaacttcaggaacctgaaactgag
gataggccccaaaaatcgcttaatcagaaacagcagttttccatcttgcaggaaaatcaa
gagctattactaaagtctatttcggaagatataggattttctgaaggcaagcctgttgct
gcctgtctgatatacaagtgtctaatacactggagatcttttgaagtagaaagaaccagt
atctttaatcgtataatcgagacaatagcatctgcagtcgagatgcaggaaaacagcgat
gtactatgctattggttatccaattccgccacactattaatgttgctccaacgcactctg
aaagccagtgctacaggaagcataactactcccagacgtcggggaatgcctacatcttta
tttggacgggtatctcagagcttccgaggttctccacaaagtgccggattcccatttatg
aatggtagagtgattggcggtgggctagacgaactccgtcaaatcgaagctaaatatcct
gctttgcttttcaagcagcaactcactgctttcctagaaaagatatacggaatgatccga
gacaagatgaagaaagagatttctcctttgcttgcttcttgcatccaggctttaaggaca
aagactccacgttctggtttagtaaagggacgttcacaaaataattttgttgcacaacaa
gtgttaattgctcattggcaaagcattgttacatgtctaaatgggcacttgaggactatg
agggccaattatgtgccttcgttgctaatttctaaagtgttcgggcaaatattttcattt
atcaatgttcagttgtttaacagccttcttttgagacgtgaatgctgctcgtttagcaat
ggggagtatgtaaaaacagggcttgcagagctggaaaagtggtgccatgatgcaacggag
gagtttgttggttcggcttgggatgaactcaagcacatcagacaagctgttggcttcttg
gtcatacatcagaagcctaagaaaagcttaaaagagatatctaccgaactttgtccggtg
cttagcattcagcaactgtacaggatcagtactatgtattgggacgacaaatacggtaca
cagagcgtatctcaagaggtgctggcaagcatgcggcatatgacttcagatgtaacaaag
aatacgatcagcagttcgtttttactagatgacgattcgagcatcccattctcgcttgac
gaaatctcgaaatcgatgcaaaacgtagaggttgcagaggttgatcctcctccgttgatt
cgccaaaactccaacttcatgttcttgttggaaaggtcaaattga

All links

Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (13)   
   Pfam (13)   
All databases (32)   

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