KEGG   Capsella rubella (pink shepherd's-purse): 17898728
Entry
17898728          CDS       T02984                                 
Name
(RefSeq) rhamnogalacturonate lyase B isoform X2
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    17898728
Enzymes [BR:crb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     17898728
SSDB
Motif
Pfam: Rhamnogal_lyase CBM-like fn3_3 CarboxypepD_reg EMC7_beta-sandw
Other DBs
NCBI-GeneID: 17898728
NCBI-ProteinID: XP_006306951
UniProt: R0IBJ4
Position
Unknown
AA seq 697 aa
MFLFSSHVFKLVTTKAYRRHLVKQRGWITALVMFMSLFQIAISQNQTPEPEPESTKVLQL
HYQDQHVVMDNGILQLTLSNPEGFVTGIRYNGIENVLATGKEYDRGYWDLVWNFPGKKTK
KTKGTLDRIEATKMEVKTQNEDLIELSFSRTWNTSSSTAVPVNIDKRFVMLRNSSGFYSY
AIFERLQGWPAVELDNIRLAIKLNKDKFHYMAISDDRQRYMPLPDDRIPPRGQPLAYPEA
VKLLDPIEPEFKGEVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSSGPLKQF
LGSHVGPTNLAIFHSTHYVGAELIMNFKQGEAWKKVFGPVFIYLNSFPKGVDPLLLWHEA
KNQTKIEEEKWPYKFIASDDFPASDQRGSVSGRLLVRDRFISSVDIPANGSYVGLAAPGD
VGSWQRECKGYQFWSKAEENGYFSINNVRSGRYNLYAFAPGFIGDYHNDTIFDISPGSKI
NLGDLVYEPPRDGSTLWEIGVPDRTAAEFYIPDPNPSFVNHLYLNHSDKYRQYGLWERYS
ELYPSEDMVYNADVDDHSKQWFFMQVTRKQANGGYNGTTWQIRFQLDDKMKNLTGNFKLR
IALATSNVAELQVRVNDLSANPPLFTTEQIGRDNTIARHGIHGLYWLYNVNVPDSSLRLG
NNTIYLTQPLATSPFQGLMYDYIRLECPDSINYITRS
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgtttctgttctcttcacatgtgttcaagctcgtgacgaccaaagcttatcggagacac
ttagtgaaacagagaggatggatcactgctttggtcatgttcatgtctttgtttcaaatt
gctatctctcaaaatcagacccctgagccagaaccagaatcaactaaagtcttacaatta
cattaccaagatcaacatgtggtaatggacaatggtattcttcaattaactttgtcaaat
cctgagggatttgtcaccggaatccggtataacggtatcgaaaatgtgctcgccaccggc
aaagaatatgatagaggttactgggacttagtgtggaactttcctggaaaaaaaactaaa
aagaccaaaggcacactagacaggattgaagcaacaaagatggaagtgaagacgcagaac
gaggatctgatagagctatcgttttcaaggacatggaatacatcttcatccacggctgtt
ccagtgaatatagacaagaggtttgttatgctgcggaactcgtcaggattctatagttac
gccatcttcgagcggttacaaggatggcccgctgttgaactcgataatatccgattagca
attaagctaaacaaggacaagtttcattacatggcgatttcagatgacaggcagaggtac
atgcctttgccagatgatcgaatcccgcctcgaggtcagcctcttgcttatcctgaggca
gttaaacttcttgaccctatagagcctgagttcaaaggagaggttgatgacaagtatgag
tactcaatggagagtaaagacataaaagtacatggatggataagcaccaatgattcagtt
gggttctggcaaatcactccaagcaatgagttccgatcttctggacctctcaagcaattc
ctaggctcccatgtcggtccaaccaacctcgcgatattccacagcactcactatgttgga
gcagaactaatcatgaattttaaacaaggtgaagcatggaagaaagtatttggacctgtc
tttatctatctcaactcttttcctaaaggtgttgatcctctcttgctctggcatgaagcc
aagaaccagacaaagattgaagaagagaagtggccttataaattcatcgcttcagatgat
tttcctgcatctgaccaaagaggatctgttagcggtagattactcgtaagagacagattc
ataagtagtgtggatatacctgcaaatggttcctacgtgggcttggctgcgccaggagat
gttggctcatggcaaagagaatgcaaaggttatcagttctggtcaaaagcagaagaaaat
ggatatttttctatcaataatgtgagaagtggtcgttataatctatatgcatttgctcct
ggattcattggtgattaccacaatgacaccattttcgatatttctccaggctcaaagatt
aaccttggggacttggtgtatgaacctcctagagatggttcaactctatgggaaatcggt
gtaccagaccgaaccgctgcagagttctacattcctgacccgaatccaagctttgtaaac
catctatacttgaaccattctgataaataccgacagtacggattgtgggaaaggtattca
gaattgtaccccagtgaagatatggtctacaatgctgatgttgatgatcactctaaacaa
tggttcttcatgcaagttacaaggaagcaagcaaatggagggtataacggtacaacatgg
cagatcagatttcaactcgatgataaaatgaaaaacttaaccgggaacttcaaattacga
attgctctagctacatcaaatgtagcagaattgcaggttcgggtgaacgatctttctgca
aatccaccattgtttacaaccgagcaaataggaagggataatacaatcgcaaggcatggt
attcatggactatattggttatacaatgtgaatgtgcctgattcttctcttcgcctggga
aataacaccatatatctaactcaaccgctagccacaagcccttttcaaggactcatgtat
gattatattcgtctagaatgtcctgattccataaattatataactagatcatag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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