KEGG   Capsella rubella (pink shepherd's-purse): 17900893
Entry
17900893          CDS       T02984                                 
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb00040  Pentose and glucuronate interconversions
crb01100  Metabolic pathways
Module
crb_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:crb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    17900893
Enzymes [BR:crb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     17900893
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 17900893
NCBI-ProteinID: XP_006304501
UniProt: R0I533
Position
Unknown
AA seq 394 aa
MAKSAITLPLLFILLTFIDVSSSASMVFNVVTFGAKPDGVTDSTAAFLKAWQGACGSVAS
ATVVVPTGTFLLKPITFGGPCKSKLKFQVTGTVVAPTDYRSFGSSGYWILFNKVNRFSLV
GGTFDARGDGFWSCRKSGQSCPPGVRSISFNSAKDVVISGVKSMNSQVSHMTLNGCTNVA
VRNIRLVAPGNSPNTDGFTVQFSTGITLTGSTVQTGDDCVAIGPGTRNFLISKLACGPGH
GVSIGSLAKQLNEDGVENVTLSSSVFTGTQNGVRIKSWARPSTGFVRNVFFQNLIMKNVQ
NPIIIDQNYCPSNLGCPTEHSGVKISQVTYKNIQGTSATQQAMKLACSKSNPCTGITLQD
IKLTYNKGTPATSYCFNAVGKNLGVIQPTSCLNR
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggcaaaatcagctataacattaccacttctcttcatcctcctcacctttatcgatgtc
tccagcagcgcctccatggttttcaacgtggtcaccttcggggccaaaccggacggagtc
accgattccaccgcagcgttcctcaaggcatggcaaggggcttgtggctctgtagcttca
gccaccgtggtggttcccacggggacatttctattgaagccaataacgtttggagggcca
tgcaagagcaaactcaagtttcaagtgaccggaacagtcgttgctcccacagattacagg
tcctttggcagttccggctactggattctcttcaacaaggttaacagattctcactggtc
ggtggaactttcgacgctcgaggtgatgggttctggtcttgccggaaatctggtcagagt
tgtcctcccggtgttaggtcaatatcgttcaactcggcaaaagacgtggttataagtgga
gtgaaatcgatgaacagccaggtcagccatatgaccctcaacggttgcaccaatgtggcc
gtccgtaacatcagattagtggctcccggaaacagcccaaacaccgacggcttcaccgtt
caattctccactggaatcacgttaaccggaagcaccgttcagaccggagacgattgtgtt
gctatcggtcctggcacccgcaacttcctcatttccaaacttgcttgtggcccaggtcac
ggggttagcattgggagcttagcgaagcagttaaacgaagacggagtagagaacgtgaca
ctatcgagttccgtattcaccggaacacaaaacggcgtgaggataaagtcatgggcgagg
ccgagtaccggattcgttaggaacgtcttcttccaaaacctaattatgaagaacgtccaa
aaccctatcataatcgaccaaaactattgtccctccaacctaggttgccctactgagcat
tcgggggtgaagataagccaagtgacgtataagaacatacaaggaacgtcggcgacgcag
caagcgatgaagctggcgtgcagcaagagcaatccatgtacaggaatcacattacaagac
attaagcttacttacaacaaaggaactcctgctacttcctactgtttcaatgctgtcggg
aaaaacctcggcgttattcaacctactagttgtctaaaccgatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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