KEGG   Crassostrea gigas (Pacific oyster): 105318755
Entry
105318755         CDS       T03920                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    105318755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crg03021]
    105318755
   03036 Chromosome and associated proteins [BR:crg03036]
    105318755
Transcription machinery [BR:crg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     105318755
   Coactivators
    SAGA/TFTC/STAGA complex
     105318755
Chromosome and associated proteins [BR:crg03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     105318755
    STAGA complex
     105318755
    TFTC complex
     105318755
    SAGA complex
     105318755
    SLIK complex
     105318755
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 DUF5814
Other DBs
NCBI-GeneID: 105318755
NCBI-ProteinID: XP_011414313
Position
LG5:complement(24988028..24990930)
AA seq 155 aa
MNPAVGKLPDGSQMLGATAVQPIAIQQPMGVRQQIPATIPGTPSQAETKVLDKRRLQELV
KEIDPMEQLDEDVEEALLNIADDFIDSIVTSACQIAKHRKSSTLEVKDVQLHLERNWNMW
IPGFGMDDLKPYKKASATEAHKQRMALIRKTLKKY
NT seq 468 nt   +upstreamnt  +downstreamnt
atgaatccagcagtaggcaaactgccagatgggtcacaaatgttaggagccactgcagtt
cagccaattgctattcagcagccgatgggggtcaggcagcagatcccggccacaattcct
gggaccccctcgcaggccgagaccaaggtcctggacaagcggcgccttcaggagctggtg
aaggaaatcgaccccatggagcagctggatgaggatgttgaagaggctttgctcaatatt
gctgatgacttcatagacagtattgtgacctctgcttgtcaaatcgccaaacacaggaag
tccagtacgctagaggtcaaggatgttcaacttcatttagagcgtaactggaacatgtgg
attcctggatttggaatggatgatctgaagccttacaagaaggcctcagccacagaggct
cataaacagagaatggcacttatccgaaagactttaaagaagtactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (56)   

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