KEGG   Crassostrea gigas (Pacific oyster): 105331028
Entry
105331028         CDS       T03920                                 
Name
(RefSeq) AP-1 complex subunit beta-1
  KO
K12392  AP-1 complex subunit beta-1
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg04142  Lysosome
Brite
KEGG Orthology (KO) [BR:crg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    105331028
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crg04131]
    105331028
Membrane trafficking [BR:crg04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    105331028
SSDB
Motif
Pfam: Adaptin_N Cnd1 B2-adapt-app_C HEAT_2 Alpha_adaptinC2 HEAT HEAT_EZ Arm Cnd3 Maestro_HEAT PDS5 UNC45-central XMAP215_CLASP_TOG Sec7-like_HUS Alpha_adaptin_C API5
Other DBs
NCBI-GeneID: 105331028
NCBI-ProteinID: XP_034318015
Position
Unknown
AA seq 931 aa
MTDSKYFTTTKKGEVFELKTELQSDKKEKKKEAVKKVIASMTVGKDVSALFPDVLNCIQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVRDCEDSNPLIRALAVRTMGCIRVDKIID
YLCQPLRNCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDQLRDLLSDSNPMVVANA
VAAISEILETSPTAQQVLEMNSSTINKLLTALNECTEWGQVFILDAISNYTPKDDKEAQS
ICERVTPRLAHANAAVVLSAVKVVMKFMEMLEANSEYISTLVKKLAPPLVTLLSAEPEIQ
YVALRNINLVVQKRPEILKNEMKVFFVKYNDPIYVKLEKLDIMIRLTSQANIAQVLAELK
EYATEVDVDFVRKSVRAIGRCAIKVEPAAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFR
KYPNKYESIIATLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLEGFQDENTQ
VQLQLLTAIVKLFLKRPTDTQDLVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPAAAKE
VVLAEKPLISEETDLIEPTLLDELICNISSLASVYHKPPNAFVEGSKSSLRKILPPRSQS
GNVGDDQPSPPAEAPSAPAATVIPGVDSLIGDLLDMDLGGPSMQQQQMYPPQPTSQTPVQ
GGGGMDLLGEGLDSLLGGPAPSGDSLGGLGDIFGMPTAQSYVPPQEVWLPASKGKGLEVT
GTFSRKQGNVIMELTFANKAMQPMTGFAIQFNKNSFGLMPASPINIPSALLPNQSTSYSL
QLSTMGAVQRMDPLANLQVAIKNNIDVFYFSCLVPMHALFVEDGEMEKRVFLATWKDIPA
QNEVQHEICNVQHNADTISQKLKNNNVFTIAKRNVEGQDMLYQSLKLTNGIWVLAELKIQ
PNNPNFMLSLKARAMDVYQGIQQAFDNILHN
NT seq 2796 nt   +upstreamnt  +downstreamnt
atgacggactcaaagtacttcactaccaccaagaagggtgaagtctttgaattaaaaaca
gagctgcaaagtgataaaaaagaaaagaagaaagaagccgtcaaaaaagtaattgcaagc
atgactgttggaaaagatgtcagtgctctctttcctgatgttctgaactgcatccagaca
gataacttggagctcaagaagctagtctatctgtatctgatgaattatgctaaaagccag
ccagatatggccatcatggcagttaatacatttgtcagggattgtgaagactctaatcca
cttattcgagccctggctgtcaggacgatgggttgtatcagggtggacaagatcattgat
tatctgtgtcagccattgaggaactgtctgaaggatgaggatccgtatgtaagaaagacg
gcagctgtgtgtgtggccaagctccatgacatcaacgctcagctggtggaggaccaggga
ttcctggaccagctccgggacttgctgtctgactccaatcccatggtggttgcgaatgca
gttgctgctatctccgagatcctggaaacctctcctacagctcagcaggtgcttgaaatg
aactccagtaccatcaacaaactactgactgccctcaatgaatgcacagagtgggggcaa
gtctttatactagacgcgatttccaactacactcccaaagatgacaaagaagctcaaagc
atctgtgagcgagtgactccccgattggcccacgctaacgcagctgtggtcctgtcagcc
gtgaaggttgtaatgaagttcatggaaatgttggaggccaactctgagtacatctctacc
ctggtaaagaagctggcccctcccctggtcaccctgctgtctgctgagccagaaattcag
tatgtggccctcaggaacatcaatctggtggtgcagaaacgaccggagatcctcaaaaat
gagatgaaagttttctttgtgaaatacaatgacccaatttacgtgaaactggagaaactg
gacattatgatcaggctcacttctcaggccaacattgctcaggtcctggcagaacttaaa
gagtacgctacagaggtagatgtggactttgtgaggaagtcagtgcgagctattggtcgc
tgtgccatcaaggtcgaaccagccgctgagcgatgtgtcagtacgctgctggacctgatt
cagaccaaggtcaactatgtagtgcaggaggccattgttgtcattaaggacattttcaga
aaatatccaaacaagtatgaaagcattattgcaacactttgcgaaaatttggacacattg
gatgaacctgaagcaagagcctccatgatttggatcattggtgaatatgcagagagaatt
gataatgcagatgaactgttggaaagtttcttagagggattccaggatgagaatactcag
gtgcagctacagctgctgacagccattgtaaaactgtttttgaagcgaccaactgacaca
caggacctggttcagcaggtgctcagtctggccacacaggatagcgacaacccagatctg
agagacaggggctacatatactggaggcttctgtccactgatccagcggcagctaaggag
gtggttctggctgagaagcccctcatttcagaggagacagatctgatcgagcccacgctg
ttggacgagttaatttgtaacatctccagtctggcttcagtttaccacaaaccccccaat
gccttcgtggagggcagtaaatcctctcttcggaaaatcctgccaccaaggtcacagtca
ggtaacgttggtgatgaccagccatctcccccagctgaggccccctcagcccccgcagcc
actgtcatccctggggtggactcccttattggagaccttctggacatggacctgggggga
ccctccatgcagcagcaacaaatgtatcccccacagcccacctcacagactcccgtacag
gggggtgggggcatggatctacttggagagggactggattctctgcttggtggacctgct
ccgagtggggattctttagggggactgggtgatatatttggaatgccaacagcacaatct
tatgtgcctccacaagaagtgtggctgccagcatctaaaggtaaaggacttgaggtcact
ggcacattcagcaggaagcagggaaatgtcatcatggaactgacatttgctaataaagcc
atgcagccaatgacaggattcgcaatacagtttaataaaaatagctttggtttgatgcct
gcatcacctataaacattccttcagcattacttcctaaccagagcaccagctattctcta
cagttgagcactatgggagcagtgcagcgaatggacccactcgcaaatctacaggtggcg
ataaagaacaacatagacgtgttctacttcagctgtctggtgcccatgcatgccctcttt
gtggaagacggtgaaatggaaaaacgtgtatttttagccacatggaaagacattcctgcc
caaaatgaagttcagcatgagatctgtaatgtacagcataatgcagacaccatttcacag
aagctgaagaacaacaatgtttttacgatagcaaagcgtaatgtagaaggacaagacatg
ttatatcagtcactcaaattaacaaatggaatctgggtgttagcagaattaaagatacag
cccaataatcccaactttatgctatccctaaaagccagagcaatggatgtataccaaggc
atacagcaggcgtttgacaacatccttcacaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (100)   
   KEGG ORTHOLOGY (1)   
   RefGene (96)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (122)   

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