KEGG   Crassostrea gigas (Pacific oyster): 105335510
Entry
105335510         CDS       T03920                                 
Name
(RefSeq) PDZ and LIM domain protein 3 isoform X2
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:crg00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105335510
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:crg04990]
    105335510
Domain-containing proteins not elsewhere classified [BR:crg04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   105335510
SSDB
Motif
Pfam: PDZ LIM DUF4749 PDZ_6 PDZ_2 HMA
Other DBs
NCBI-GeneID: 105335510
NCBI-ProteinID: XP_011437719
UniProt: K1PXC3
Position
LG10:47087072..47093808
AA seq 324 aa
MSNLEYQPAETLTVQLYRPDPSVSWGFRLQGGVDFSTPLSIQSVNPGSVAERSGLFAGDG
ILCINDTNADDLSHEQAKMCIIRAGNTITMTVQRGAVKIWKPKVTPMSDLRPAQMNTIKT
ATGDEVQTVQKTSLTRENQPEPLNIGSSYNRSGKPFAAQRQVQSPKQAVPNVVHAQFNSP
IGLYSANNIADTYAAQTAGIQQQMQDLDVTQSPVGAKMSGTYQPLEDKPSGFRSVRAPDA
VEPSQSKPAQENMHCGDCNMLVTGVFVRVKGVPYHPQCFKCTSCGVNLKQKGYFVVDGRL
YCEVHAKQIAQPPGPNMKAVPVYR
NT seq 975 nt   +upstreamnt  +downstreamnt
atgtccaacttagagtaccagccggcggagaccctaaccgtacagctctaccgccccgac
cctagtgtctcctggggatttcgactccagggcggggtagactttagcacccccctctcc
atacagtcggtgaacccagggagtgtggccgagcgcagtggattatttgcaggggatgga
atcctttgcattaatgataccaatgctgatgatctctcacacgaacaggccaaaatgtgt
atcatccgggcagggaataccatcaccatgacagttcaaagaggtgcagtcaaaatttgg
aaacccaaagtgactcctatgtcggaccttcgacctgcccagatgaacaccatcaaaaca
gccacaggagatgaggtgcaaactgtccagaaaacatcactgactcgtgaaaatcaacca
gaacctttgaacattggtagcagctacaatagatcaggcaagccttttgcagcacagcgc
caggtccagtctccaaagcaggctgtgcccaatgttgtccatgcccagtttaactcgccc
attggtctgtactcagccaataatattgctgacacatacgcagcccagacggcaggaatt
caacaacaaatgcaagatttagatgtaactcagagtcctgttggggccaagatgagtggc
acctatcaacctctggaagacaaaccctcagggttccggtcagtgagggctcctgatgct
gtggaaccatcccaatccaaacctgcccaggaaaatatgcattgtggggactgcaacatg
cttgtcacgggagtgtttgtgagggtgaaaggtgtaccatatcacccacaatgttttaaa
tgtacttcctgtggggtaaacttgaagcaaaaaggctactttgtcgttgatggacgatta
tactgtgaagtacatgccaaacaaattgcccagccccctggtccaaacatgaaggctgtt
cctgtgtaccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (79)   

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