KEGG   Crassostrea gigas (Pacific oyster): 105336135
Entry
105336135         CDS       T03920                                 
Name
(RefSeq) huntingtin
  KO
K04533  huntingtin
Organism
crg  Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:crg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crg03019]
    105336135
   04131 Membrane trafficking [BR:crg04131]
    105336135
   03029 Mitochondrial biogenesis [BR:crg03029]
    105336135
Messenger RNA biogenesis [BR:crg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105336135
Membrane trafficking [BR:crg04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    105336135
Mitochondrial biogenesis [BR:crg03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    105336135
SSDB
Motif
Pfam: Htt_N-HEAT Htt_C-HEAT Htt_bridge Htt_N-HEAT_1 HEAT PagP
Other DBs
NCBI-GeneID: 105336135
NCBI-ProteinID: XP_034328016
Position
LG4:32085011..32122428
AA seq 3009 aa
MATIEKLIKAFEALRVFQPSGSTADDAAKKKEQAPVSKKDKMVNCNLVADCISAPNMRAI
VDFPKFLGIAMETFLTMCDDTESDVRMVADECLNRSIKILLETNLGRLQVELYKEIKKNG
SSRTLRAALWRFSEMSHLIRPQKCRPYIVNLLPCVARISKREDEAIQDILAQSMQKICPP
LIGFANESEIKALIKSFLPNLRSTSAVTRRTAASCLVLICEHSRSSASFYNYLLGSLLDM
VIPVEEETSLHCLIGVLLCLRSLIPHLSESAHDKQGLKGSFGVMTKEKEQTVSKEQIIKV
FQLLLHLMGHTDHNVVTGALETFQQLLRHPSPLLVSLLTTPKSIPRSHIFKSDQDLQPGE
GLSEVPSMSKFPEDGNVGDEIDSIVDPSEATEGNVDDIVASYQAQMANKDNESSDAVDNV
AGLDVDTCDAGIVVTTLDTRYSGIEIGDLNEDVSERSNMSQVSSANGSQQSLNKLSSPQK
TMKRGGQDMNGNPELDEDVLPESEGKSQAPNSDPVDVTKNLGSLFEDMPLEFCIRVLCRR
FLLGGTKDKLIPDRVVRVSIKSLALGCVSYTMMIRPHILFMNVFKEVNEDNDQLIKDVLL
YASHIDPQLKGAATLICGNLIKSSLSQGRGDFNKWVEEFAPESSVTINHLVEIILHILED
ESSVAVRLALLGVRKCLSPLLMGTHSPVGLEAVIKLLSIQNNPYWLVKVELLEIFSSLNF
NVLNHLESCCTDVQRGTNHFLGKLHIQDRILTFVIEMLGSDDTRVRHCASEALVKIVPKL
FFSCDHPQHDPIITEARLHTEKMLCPMVSDFVLDPPPLVLGLTKPYSISNGSVSSHIESN
LSRVVVSALHQLNMSQSKHLTYGCCHALYLLSETFPSTLYAHSWGCGPSTSFLPKDSSSK
GIMKRPPSRSHSNSRTMMGYVWSGTFSIDEMSSGSGGGPLTIILPLLTSSNVSLDLAAHS
DTLQFAGNLVAGAVYRCMQPVDDSSSGSEGDGIKWAAVSDRLLVPLLDQLFYHIARVLNC
CVHVIDEQVPGPTPVKPSLPSLPNAPSLSPIKRKNKMDSPNDSPAKGGTPDGKTPSKQQK
EKEKEQEKEKEKTKKDSLGVFHSLPHYMKLYDVLKGAYSNYKVSLDLTVTDKFCSLLHTS
LVTLSQILEITTLEDIGKYADEILQYLKTTIVLEPTESIRCVQQLLKALFGTNLICQWEP
QHLQNLSGKPGKAARLTGNNKPGQYYFCFTQPYTQFTQSLAGATFKASSHTEQEESSGAL
STLRKCIERKLPAVLRPNSKTEKSTIASYIRLFEPLVIKALKQYTVSSGLDLQQQVLDLL
SQLIQLRVNYCLLDSDQVFIGFIIKQLEFIEEGQIRNSETLIPNIFSFLVMLSYEKTHSK
SIIAMPKIIQLCDGIMASGLQPVSHAIPALRPVVFDLFLLRGGNKPDISRDLETQREVLV
SMLLRLIQYYQTLDLLVVVLQQSKKESEERWKRLSRQVTDTLLPALISNQVNLDNSDSLD
VLHRLFECLAPIVFRPVDILLKTLLQAPTGIGSLENLQRWMCLVLSVIRVLMAQSKEEVI
LSRLTELRIRLALFKTPVSKMSDEQKQIVLDLTPEQILARFLVQVIGKCLEMIIEHEWSY
LGSHDHAHFLSQQLSQLLLYITHMFQSGMFRKVANCALQIAREEEKEGFYSLRELNRHFL
LLSMTMPTLTLQWCNILILLNYEDQSLWSDVMQTPNRHLKPGTSQSTSHEAHPVAETHCC
NQEILRRGGIILFCDFVCENMLDAEHMTWLVINHVTDLIQLSRESPVQDFISAIHRNSAA
SCLFIQAIHSRGQDVSKPSLIKKTMKCVEAIHLSQTGALLTLLIDKFLNTHHLSVARLCD
TIACHRVEMLLADNFEDAKKQLPVVDLDKLLKFMETHSLLKRHARLVSLLQKLRGTLNPE
TSLSLCKGASHPVLHQTECVHNQMDKDMYLSLVKYQCFHPDSSPRECSLLLHKLEYAEIL
AVTMTKEFSLDILSECLILGIKHTLIKSTDSVTVLDSEGNQVLQEPVTDNLFQAAQLTLT
RHINYVINLLPVPHQILSFSSLYVKESQYQEKMNDVFSDSSWRDMIFSLTKTLNCYLQSL
ARLPWKPDIPAESHCDICKFSVLCMELLCWMFHNDILPTSEQLNTCLMCTAVILQNQQLS
AVIGHKDHVSWVASVVSSIYQVFLSLVLIPGDKLVTTSQESFEEPNSQNELSVIVKACDQ
ISELVQYLLSSSRSSYSVPQFVDCHLTTIIISLARLPALNSYARTPSLVWKLGWTPTPSG
ELRTHLPPLPVDYLKDKDVLKEFVSRINMLGWINRQQFEETWMSLLAVLNPVIEDVSEHI
PQEEEIERSQCMVIAVKAITAMLLQSTLTPVPGNPSNSVFEVRPRDKPLGFLHTRCGKKL
TIIRGIIEKEVQDLYRKCEDRSSCSLGEGEDHDVLRYMFDNNLEREADDSTYNLGQVSVE
SIWSVVGALHVQTADSDTPDSVNSPDQENTEKPPPLPSQQQFPLISIDKRERTVSLSGLD
IHSCLQFLLELYGQWLSPNSILKPPLMLKTEVVKSLVSLSDLFVEREQYEWMLDFLLDIY
KAHPQEDEIVMQYINVGLSKAGAVIGLDSSAIEKLMKQLDIGLRSPHLPSRIAAMHGILY
LLEAGVQEITKPLMPIATDFLLRNLGSISQTCITSQQYILTMWATGFYIMENYHVDLKDL
EFPSKILQLAVSTASGNEESVTTPVYLAILKGLERLLLTDVLSQQDSDAIVKLGVDRLCL
PSPQRSLAALGLMFTCMYSGKQYDQYSPLPRDSAAYDFNVVYQDPESLIVAMERVTVLFD
RIKKGYPYEARVITRVLPTFLADFFPPQDIMNKIIGEFISSQQPYPQMIAMVVFQVFNNL
HNQSQEALVQDWVMLSLSNFTQRTPVSMATWSLTCFFISASTNSWLRPLINHVINRMGKM
EAVDQNLFCMAALDFYSILKDKQQQWAFISTFQNVSTLGPPYTDLLGRLEKAYPEHFSQK
KLIKPHPLT
NT seq 9030 nt   +upstreamnt  +downstreamnt
atggcaaccattgagaagctgatcaaagcttttgaggcactgagggtgtttcagccctca
gggtctacagcggatgatgcagccaagaaaaaggaacaagcacctgtcagcaaaaaagac
aaaatggttaactgcaatcttgtggctgattgtatatctgctccaaacatgagagcaatt
gtggactttcccaaattccttggcattgcaatggaaacttttcttaccatgtgcgatgac
acagagtcagatgtgagaatggttgctgatgaatgtttgaacaggtctataaagatattg
ctggagacaaacttgggaaggttacaagtggaactgtacaaagaaatcaagaagaatggc
agcagtcggacattgagggcagccttgtggagattctcagagatgtctcatctcatccgt
ccacagaagtgcaggccatacatagttaatctactgccttgcgttgcgagaataagcaag
agagaagatgaagccattcaggatattttagctcaatccatgcaaaagatttgtcctcct
ttaataggatttgcgaatgaatctgagattaaggctctcattaaatctttcctaccgaac
ttgagatctacgtctgccgtgaccagaaggaccgctgccagctgcctcgttctgatctgt
gaacacagcagaagttctgcctccttctacaactatctactggggtcactccttgacatg
gtgatcccggtggaggaggagaccagtctccactgtctgattggggtcctgctgtgcctg
agatccctcatcccccatctcagtgagtccgcccacgacaaacagggcctcaaaggcagc
tttggtgtgatgactaaggagaaagaacagactgtcagcaaagaacaaatcattaaggtg
ttccagttattgctgcatttgatgggacacacggaccacaatgtggtgacaggtgccctg
gagaccttccagcaactcctgagacacccctccccactgctggtctctctactgaccaca
cccaaaagcattccccggtcccacatcttcaagtcggaccaggatctgcagcctggggaa
ggattatcagaagttccctccatgtccaaatttcctgaggatggaaatgttggagatgaa
attgattccattgttgatccctcagaggccacagaagggaatgtggacgacattgtagcc
agctaccaagctcagatggcgaacaaagataacgagagttccgatgcagtggataatgtt
gcaggattggatgtggacacgtgcgatgctggcattgtggtgactaccctggacacaagg
tactcagggatcgaaattggggatttaaatgaagacgtgtcagaaagatcaaatatgtcg
caagtctctagtgctaatggcagccagcaaagtctgaacaaactgtcctcgccccaaaaa
acaatgaaaaggggaggtcaggacatgaatggaaatccagaacttgacgaggatgtttta
cccgaaagcgaagggaagagtcaagcgccaaattcagacccggtggatgtgaccaagaat
ctggggagcttgtttgaggacatgcctctagagttctgtatacgagtcctatgtcgaaga
tttttactgggaggaaccaaagacaaactgattcctgatcgcgtggttcgtgtcagcatc
aagtctctcgctcttggatgtgtcagctacactatgatgatccgaccacatatattattc
atgaatgtatttaaagaagtgaatgaagacaatgaccagttgattaaggacgtgttgctg
tacgccagtcacatagatccccaactaaagggggccgccacacttatctgtggtaacctg
atcaagtcctccctgtcccaggggagaggcgacttcaacaagtgggttgaggagtttgcc
ccagagtcatcagtaactatcaaccatctggtagagataattctgcacatactggaggat
gagtcctcagtggctgtccgtctggctctcctgggggtcaggaaatgtctgtcacccctc
ctgatggggacccacagcccagtagggcttgaagcagtcatcaaattactaagcattcag
aacaacccttactggctggtcaaggtggaacttttggagatattcagttctctgaatttc
aatgttctgaaccacctggagtcctgttgtacagatgtacagagaggaactaatcacttt
ttggggaaactacacatacaggatagaattctgacgtttgtgattgagatgttgggaagt
gatgataccagagtaagacactgtgcctcagaggctctagtcaaaattgtgccaaaattg
tttttctcttgtgatcaccctcaacatgaccccattataacagaagcacgccttcacact
gagaagatgctctgccccatggtgtcggactttgttttggatccacctcccctggttttg
gggttaacaaagccatacagtatcagtaatgggtcggtctcttcccacattgaaagtaac
ctgtccagagtagtcgtttctgcattacatcagctgaatatgtctcaatccaagcactta
acgtatgggtgttgccatgccctgtatctcctgtctgagaccttcccctccaccctctac
gcccactcctgggggtgcggtccctccacctccttcctccccaaagactccagcagcaaa
ggcatcatgaaaagaccacctagtcgatcccacagtaactcaagaaccatgatgggttat
gtctggtcaggcacattcagcatagacgagatgtcgtcggggtcgggagggggacccctc
accatcatccttccccttttaacctccagcaatgtcagtctggatctggccgcccatagt
gacaccctgcagtttgctggcaatttagtggcaggtgctgtatacaggtgtatgcagcct
gttgatgactcaagctctggaagtgagggtgatgggatcaagtgggcggcggtgtctgac
cgacttctggtcccactcctggaccagctgttttaccacatcgccagggtcctgaattgc
tgtgtccatgtgatagatgaacaggtgccaggccccacccctgtcaaaccctccctgccc
tccctacctaatgctccctccctcagtcctattaaaagaaaaaacaaaatggacagtccc
aatgattctccggccaaaggaggcactcctgatggcaaaactccctcaaaacagcagaaa
gagaaagaaaaagaacaagagaaagagaaggagaagaccaaaaaagactccttgggggtg
ttccacagtctgcctcattacatgaagttatatgatgtgttaaagggagcttactctaac
tacaaggtgtccctggatctgaccgtgacagacaagttctgtagtcttctccacacttca
ctggtcacgctgtcacagatactggaaatcaccaccctggaggacatagggaagtatgct
gatgagattctccagtacctaaagactaccattgtcttggagcccaccgaatccatcaga
tgtgttcagcagctactcaaagccctatttggaacaaacttgatctgtcagtgggagcct
cagcatttacagaacttgtccgggaagcctgggaaagcagcccgcctgacgggcaacaac
aagcctgggcagtactacttctgttttacccagccctacacacagttcacacagtccctg
gccggggctaccttcaaagcctcctcccacacagagcaggaggaatcctcaggagctttg
agcactttacggaaatgtatagagaggaaactaccagcagtcctaagaccaaacagtaaa
actgaaaaatccaccattgcttcttacattcgactgtttgagcctctggtcatcaaagcc
ctgaagcagtacacagtatctagtggccttgaccttcagcagcaagtccttgaccttctg
agtcagctgatccagctaagggtcaactactgtctcctggactcggatcaagtgttcata
gggtttatcatcaagcagctggagtttatagaggaagggcaaattaggaattcggaaact
ctaattccaaacatctttagtttcttggtgatgctctcctatgagaagactcacagtaaa
tcaatcatagcgatgcccaagataatacagctgtgtgacgggatcatggccagtggacta
caaccagtgtctcacgccattcctgccctgaggccagtggtgtttgacctgtttttgttg
cgcgggggcaacaaacccgacatcagtcgagacctggagactcagagggaggtgctggtg
tccatgctgctccgactcatccagtactatcagacattggacttgttagtggtggttcta
cagcagagtaagaaggagagtgaggaacgctggaagaggctgtccagacaggtcacagac
actctcctacctgccctcatcagtaatcaggtaaacctagacaactccgactcactagac
gtcctacatcgactgtttgaatgcctggctcccattgtattcagaccagtggatatcctt
ctgaaaacattgttacaagctccaacaggcataggaagccttgagaaccttcagcgatgg
atgtgcctggtgttgtctgtgattcgagtgttaatggctcagtccaaggaggaggtgatc
ctgtcacgcctgactgagctcagaatccgactggctctcttcaaaactcctgtctccaaa
atgtccgacgaacagaagcaaattgttctggatttgacaccagagcaaattctggccaga
tttctggtacaagtgatagggaaatgtctggagatgatcatagaacatgagtggtcgtat
cttgggtcacatgaccacgctcacttcctgtctcaacaactgtcccaactcctgctgtac
atcacacacatgttccagtcaggtatgtttagaaaagtggcaaattgtgccctgcagatt
gctcgagaggaagaaaaagagggtttctacagcctcagagagctcaatcgtcacttcctg
ttgctctccatgacaatgccgaccttgaccttacagtggtgcaacatcctgatcctcctg
aattacgaagaccaaagtctgtggagtgatgtgatgcagacccctaatagacacctcaaa
ccaggcacaagtcagtccaccagtcatgaggcccaccctgtggcagagactcattgctgt
aaccaagaaatcctacgcagaggtggaatcattcttttctgtgattttgtgtgtgagaac
atgttggacgctgaacacatgacctggttagtgattaaccatgtgactgacctaattcag
ctgtcccgggaatcccctgtccaggacttcatcagtgcaatacacaggaactctgctgcc
agttgtctgttcattcaggctattcattccagaggccaagatgtctccaagccatcgctg
atcaagaagacgatgaagtgtgtggaggccattcacctcagtcagacaggggcccttttg
accttgttgattgacaagttcttgaacacccaccatctgtctgtggcccgcctctgtgat
accatagcctgtcaccgcgtggagatgttactggccgacaacttcgaggatgccaaaaag
cagttgccagtagttgatttagacaaactcctgaagtttatggaaacccactcattgttg
aagagacatgcccggttggtgtccctgctacagaagctgagggggacactgaaccccgag
acatccctgtccctgtgtaaaggggccagccatcctgtgctccaccagacagagtgcgtc
cacaaccagatggacaaggacatgtacctgtctctagtgaagtaccagtgttttcacccc
gactccagtccccgggagtgcagcctactgctacacaagctggagtacgccgagatactg
gcagttaccatgaccaaggagttcagtctggacattttgtcggaatgcctgatcctgggg
atcaaacacaccctgataaagagcacggactcggtgaccgtgctggacagcgaggggaac
caggtgctccaggagccggtcactgacaacctcttccaggccgcccagctgaccttgacc
cgacacatcaattatgtcatcaacctgctccccgtgccccaccaaatactgagcttttcg
tccctctacgtgaaggagagtcaatatcaggagaagatgaacgacgtcttctccgactcc
tcgtggagggacatgatattttccttgacaaagacactgaactgttatttacagtctttg
gcgaggttgccatggaaaccagacattcctgcagaatctcactgtgatatttgtaaattt
agtgtactttgcatggagctgctgtgttggatgtttcacaatgacatactgcccacctca
gaacagttaaacacgtgcctaatgtgtacggcagtcatcctgcagaatcagcaactctct
gctgtgattggtcacaaagatcatgtgtcgtgggtagcatctgtagtttcttctatctac
caagtctttctctcattggtactcattccaggggacaaactagtcacaacaagccaagag
tcgtttgaggaacccaacagtcaaaatgaattatctgtgattgtcaaagcctgtgatcag
atttcagaacttgtgcaatatctgttgtccagcagtaggagttcttactcagtgccacag
tttgtagactgccatctcactaccatcatcatatcattggctcgcctacctgccctgaac
agttacgctcggacgccctcattagtctggaagctgggatggacccccactccatcaggg
gaactgaggacgcacctgcctcccttgcctgttgattatctcaaagataaagatgtcctc
aaagaatttgtgagcaggattaatatgttagggtggatcaatcggcagcagtttgaggag
acgtggatgagtttgttagcagtgttgaaccccgtcatagaggatgtctcggaacacatt
cctcaggaggaagaaattgagaggtctcagtgtatggtgatagctgtcaaagccatcaca
gccatgttgttacagtcaactttgaccccagttcctggtaaccctagcaacagtgtattt
gaagttagaccaagggacaaacctctgggctttcttcatacaagatgtggtaagaagctg
actatcattcgaggcatcattgaaaaggaggtccaggatttgtacagaaaatgtgaggac
cggtccagctgtagcctgggggagggagaagaccatgatgtcctccggtacatgtttgat
aacaacctggagagggaggctgatgactccacctacaacctgggacaggtgtcagtggag
tctatctggtcagtggtgggagcccttcatgtacaaacagctgactcggacacgccagac
tctgtcaatagcccggaccaggaaaacactgagaagccaccaccccttccatcccaacaa
cagttccctctcatcagcatagacaagagagagcggacggtctccctgagcggccttgac
attcactcctgtctgcagtttctgttggagctgtatggacagtggctgtctcccaacagt
atccttaaaccgccgctgatgctgaaaacagaagtggtcaagtcgctggtttccctgtcg
gatttgtttgtggagagagaacagtacgagtggatgttggatttcctgttggatatatac
aaggctcatccacaagaagacgagattgtgatgcagtacatcaacgtgggcctcagtaaa
gctggggccgtcattggactggatagttcagccattgagaaactgatgaagcaattagac
ataggactcaggagcccacatttgccgagcagaatcgccgccatgcacggaattctgtac
ctgctagaggcaggtgttcaggaaataacaaaacctttgatgccaatagcaaccgacttc
ttactcagaaatttaggcagcattagccagacttgtataactagtcagcagtatatttta
acaatgtgggccacaggtttctacatcatggaaaattatcatgtggatctgaaggatctg
gaatttccaagcaaaattcttcagcttgcagtttccacagcctctggaaatgaggagagt
gtgaccactcccgtgtatctggctatccttaaaggcttggagagactgcttctaactgac
gtcctctcccagcaggactcagacgccatcgtcaaactaggtgtggacaggttgtgtttg
cccagtccccagagatctctagcagcccttggactgatgtttacatgcatgtactcaggt
aaacagtatgaccagtacagcccccttcccagggactcagcggcctacgatttcaatgtg
gtgtaccaggacccggaatctctgatcgtggccatggagcgagtcactgtcctctttgac
agaataaagaagggctatccttatgaagcaagggtcattactcgagtacttcctacattc
ctggctgatttctttcctccacaagacatcatgaacaaaatcatcggggagtttatctcc
agtcagcagccctaccctcagatgatcgctatggttgtgttccaggtgtttaacaatctc
cacaaccaaagccaggaggctctagtccaggactgggtcatgctgtctctatccaacttt
acccagcggacccctgtatccatggcaacatggagtttgacctgtttcttcatcagtgcc
tcaacaaactcctggcttaggcctctaattaaccacgtcattaacaggatggggaagatg
gaggccgttgaccagaatttgttctgcatggccgctctcgacttctattccattctgaag
gacaaacagcaacaatgggccttcatttcaacattccagaatgtgtcaacacttggaccc
ccctacactgatctgctggggaggctggaaaaagcctaccctgagcacttctcccagaaa
aagttgatcaagccccacccattgacctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (101)   
   KEGG ORTHOLOGY (1)   
   RefGene (97)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (116)   

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