KEGG   Crassostrea gigas (Pacific oyster): 105339123
Entry
105339123         CDS       T03920                                 
Name
(RefSeq) uncharacterized protein LOC105339123 isoform X1
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg00260  Glycine, serine and threonine metabolism
crg01100  Metabolic pathways
Module
crg_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:crg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    105339123
Enzymes [BR:crg01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     105339123
SSDB
Motif
Pfam: GMC_oxred_N Hydrolase HAD_2 GMC_oxred_C Hydrolase_like HAD Lycopene_cycl NAD_binding_8 DAO Pyr_redox_2 Thi4 FAD_binding_2 HI0933_like
Other DBs
NCBI-GeneID: 105339123
NCBI-ProteinID: XP_011442837
Position
LG6:complement(5934533..5940781)
AA seq 1200 aa
MFGLSSIFRLLSRSSQRYLHYRSALPVVSARSQSKTKYDKHQSSTTARPIWSSAAVGSEG
RGTFNNVRRRTDQTKKASLVIFDKDGTLIDFQSLWTPWTKKLVARIQEATGLTGIEGKIC
DILGFCLKQQKVVPGMLAEATTPQIKVEMTKMLVGEGLKETNVKEILDRVWTEGNVRNPD
ELKKIGELETLFKILKKNNVRIALITSDNRKGTDELLDELKLTEYFEYVICGDDPDSEPK
PSPYNALKICKKLGVDPADTVMVGDTKTDMLLGKSAKLGWSVGVLSGVGQIGDLLPHADH
IVEDIEDILPIILPFDDWQSSYVYSSNDRFLVKPKDQDHTGVPSAKSPVDLVIFDLHGTL
ICIHRKYPKFVEFFCSRLKRMTGMDMLAKLTKLLGLNEDSTRMMHGVLTEGTPSEARGVV
VEALRREGIAYQEAIMLVNKIWTEGEFILKSEPTPLSSNLEETFKELKRNGVKIAINTGE
PREFVVLDLMNLGLTNYIDMLVCGDDPISQAKPSGHNTLLICNELSVNPSKTVVVGDSVG
DLQMGGSAFVMKKIGVLSGVGNEEELKPYADCLVPSIENINDIILEKGKSEATDGSGVSG
KGRETFSCFQKSILSPASGSGSQMHQPCRSFSTSRPCSVHIASDTERYDFIIVGAGSAGC
TLANRLTADRNRKVLLLEAGPRDLWHWDSWKIYMPAALMYNLCDDKYNWYYHTEPEKGMN
NRVMYWPRGRVWGGSSSLNAMVYVRGHAFDYDRWEKEGATGWSYADCLPYFRKAQTHVLG
ANDYRGGDGPLHVFRGRSKNPLCQAFLDAGVQAGYPFSDDMNGYQQEGFGWMDMTIHNGK
RCSAAAAYLHPIKSRPNLSTKTNILARRILFEGKRAVGIEYLKDSGVQKVYGEEIILSGG
AVNSPQLLMLSGVGNADELCQLEIPVVQHLPGVGENLQDHVEVLVQQECKQPITLYKAQW
KYPHVMIRIGLEWFLRQTGDGATNHFETGAFIRSEPGIEHPNVQYHFLASIINNHGRVSG
DRHAYQAHVQILRPTSRGYIKLKSCDPREHPRIVPNYLTTEQDIREMRDCIKLTREIFQQ
KAFDSYRGPELTPGKDVQSDEEIDEYNRNMSETAYHPSCTCKMGSESDPMAVVDPTSSRV
YGLEGLRVVDASIMPSVVSGNLNAPTIMIAEKTADIIIGNKPLPRASAPVYKPKSLDSQR
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgtttggtctcagttccatctttcgacttttaagtcggtcgtcacaaagatacctacac
tacagatccgcactccctgtggtcagtgcaagaagtcagtccaagacaaaatatgataaa
catcagagttctacaacggccagaccaatctggtccagtgccgctgtagggtcagagggc
aggggtacgttcaataatgttagacgcagaacagaccagaccaaaaaagcctccctggtg
atttttgacaaggatggaacccttattgacttccagtccctctggactccatggaccaag
aaactggttgcaaggattcaggaggccacgggtttgacagggattgaaggaaaaatatgt
gacatcctgggattttgtttgaaacaacagaaggtggtacctgggatgctggctgaagcc
accaccccacaaatcaaggttgaaatgacaaagatgctggttggggagggattaaaggag
actaatgtcaaagaaattcttgaccgagtctggacggagggaaacgtaagaaatcccgac
gaactgaagaaaatcggagaacttgaaacactgtttaaaatcctgaagaaaaacaatgtc
agaatagctctcattacctcagacaatcgcaaaggcacagacgagctactggatgagctt
aaactaacagagtattttgagtatgtgatctgcggggatgaccccgattctgagcccaag
ccatccccttacaatgccctaaagatctgtaagaagctaggggttgacccggcagacaca
gtgatggtgggggacactaaaacagacatgctgctggggaagtctgccaagcttgggtgg
agtgtgggggtactgagtggggtggggcagattggtgacctacttccccacgctgaccat
attgtagaggacatcgaggacattctgcccatcattctgccctttgatgactggcagagt
tcctatgtttactcttctaatgacagatttctggtgaagcctaaagatcaggaccatact
ggggtcccttcagcaaaatctcccgtggacttggtgatctttgacctccatggaacactc
atctgcattcaccggaaatatccaaagtttgtggagttcttctgctccagattgaaaagg
atgactggaatggacatgcttgccaagttaacaaagctactgggactaaatgaggattct
actcggatgatgcatggggtcctgactgaaggtacaccatctgaggcgagaggggtggtt
gttgaggcgcttcgaagggaaggaattgcctaccaggaggccatcatgctggttaacaag
atatggacggagggagaattcatcctgaagtcggagccaaccccactcagctcaaatcta
gaggaaacattcaaggaactcaaacgaaatggagttaagattgccataaacacaggagag
cctagggaatttgtagtgcttgatctgatgaaccttggcctaactaactacattgatatg
ctggtgtgtggagacgatcccatctcccaagccaagccatcaggccacaacactctctta
atctgtaacgagctgagtgtgaatccgtcaaagacggtggtggttggggattctgtaggg
gaccttcagatgggaggctctgcctttgtgatgaagaagatcggcgtattgtctggagta
ggaaatgaagaggaactcaaaccttacgccgactgcctagttccaagcattgaaaacatc
aatgatatcatcctagaaaagggcaaatcagaagctactgatggctctggggtgtctggc
aaaggtagggaaacattttcatgttttcaaaaaagtattttgtccccagcttctggttct
ggttcacaaatgcaccaaccttgcagaagcttctcaacttctaggccttgctcagtccac
atagcctctgacactgagaggtatgacttcatcattgttggggctggctctgcaggttgt
accttagccaatcggctgactgcagatcgcaacagaaaggtgctcctactcgaggcaggg
ccaagagacttgtggcactgggactcctggaagatttacatgcctgctgctctgatgtac
aatctgtgtgatgataaatacaactggtactaccacactgagccagagaaaggaatgaac
aaccgtgtcatgtactggccccggggacgtgtatggggagggtcatcttccctcaatgcc
atggtatacgtcaggggacacgcctttgactacgaccgctgggagaaggagggagccact
ggctggtcatatgccgattgtctaccttattttcgtaaagctcagacacatgtgctggga
gcaaatgactacagaggaggggatggccctctccatgttttcaggggaaggtcaaaaaat
cctctctgtcaggcttttcttgatgcaggtgtgcaagctggctatcctttctcagatgat
atgaatgggtatcagcaggaaggctttggatggatggatatgaccattcacaatggaaaa
cgatgcagtgccgctgcagcttaccttcatccaatcaaatccaggccaaatttatccacg
aaaacaaatatcttggcaaggcgcattctgtttgaaggaaagagggctgtaggaatagag
tatctcaaggattctggtgttcagaaggtgtacggtgaggaaataatactaagcggtggg
gcagtcaactctccacagctcctgatgttatcaggggttggaaatgcagatgaactttgc
cagttagagatcccagtggttcagcacctacctggagtgggggaaaatctccaggaccat
gtagaggtgcttgttcaacaggagtgcaaacagccaatcacactgtacaaagcccaatgg
aagtatccccatgtaatgatcaggatcggtctggagtggttcctccgacagacaggtgat
ggggccaccaatcactttgagacaggggcttttatacggagcgagccagggatagagcat
cctaatgttcagtatcactttctggcttccatcatcaataaccatgggagagtatcggga
gatagacacgcttaccaggcacatgtacagatacttcgcccaacaagcagggggtatatc
aaactaaagtcatgtgatccccgtgaacatccaagaatagtgcccaactacttaacaact
gaacaagacattagagaaatgagagactgcatcaagttgaccagagaaatatttcaacag
aaagcatttgattcttacagggggcctgaactcacacctggaaaagatgttcaatccgat
gaagaaattgacgaatataaccgaaacatgagtgagacagcttatcacccatcatgcacc
tgtaaaatgggatcagagtctgatcccatggcagtagttgatccgacctctagtagggtc
tacggtttggagggcctaagagttgttgatgcctccattatgccaagtgttgtcagtggt
aatctcaatgctcccactatcatgatagctgagaaaacagcagacattatcattggaaat
aagcctctccctagggccagtgcccctgtgtataaacccaagagtcttgattcccagcga
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (97)   
   KEGG ORTHOLOGY (1)   
   RefGene (93)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (13)   
   Pfam (13)   
All databases (128)   

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