KEGG   Crassostrea gigas (Pacific oyster): 105341219
Entry
105341219         CDS       T03920                                 
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF1 isoform X1
  KO
K10656  E3 ubiquitin-protein ligase MARCH1/8 [EC:2.3.2.27]
Organism
crg  Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:crg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:crg04121]
    105341219
Enzymes [BR:crg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105341219
Ubiquitin system [BR:crg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   March proteins
    105341219
SSDB
Motif
Pfam: RINGv
Other DBs
NCBI-GeneID: 105341219
NCBI-ProteinID: XP_011445907
Position
LG10:complement(56475389..56502107)
AA seq 274 aa
MHGGINTMPLTQIAVHPSDNVPQSGKPPKKPQPTPIKKKDSAKETLHVNSPTPKLSERCE
TSLSMLSSGQDCCRICQCEVCEIEDDSPLIAPCLCDGSMKFVHQECLQKWIKSSDKECCE
LCKYEYKMTSKVKPFRKWERLQMSAVERRKITCSVTFHVIAITCVIWSLYVLIDRTTEEV
EQGALDWPFWTKLIVVAIGFTGGLVFMYVQCKMYVRLCRKWKAYNRMITVENVPDEVRVK
AIATYTSPEKAKIAQEEREGGIINESLTTDSELL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcatggtggaataaacaccatgcccctgacacagattgctgtccatccctcggacaat
gtcccacagtcaggcaaacctcccaaaaaaccccagcccacaccaatcaaaaagaaggac
tccgccaaggagaccctccatgtgaactcccccacccccaagctgtcggagcgatgtgag
accagtctgtccatgctgtcctcaggccaggactgctgtcggatttgtcagtgtgaggtg
tgcgagattgaggatgactcgcccctcattgcgccctgcctctgtgacggcagcatgaaa
tttgtacaccaggagtgtctacagaagtggatcaaaagctccgacaaagaatgctgcgag
ctctgtaaatacgagtacaagatgacgtccaaagtcaaaccattcagaaagtgggagaga
cttcagatgtccgccgtggagagacgcaagataacgtgttctgtgacattccatgtgatc
gccatcacgtgtgtcatctggtcgctgtatgtgctaatcgacagaaccacggaggaggta
gaacaaggggcgttagactggccgttctggaccaaacttatcgtggtcgccatcggcttt
actgggggcctcgttttcatgtacgtccagtgcaaaatgtatgtcagactctgtcgtaaa
tggaaggcatacaaccgaatgatcacagtggaaaatgtgccggatgaagtgagggtgaag
gccatagcgacgtatacgtcccctgagaaagcaaagattgcgcaggaagagcgggaaggg
ggaataatcaacgagagcttgactaccgattctgaactgttgtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (67)   
   KEGG ORTHOLOGY (1)   
   RefGene (63)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (81)   

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