KEGG   Crassostrea gigas (Pacific oyster): 105343042
Entry
105343042         CDS       T03920                                 
Name
(RefSeq) DDB1- and CUL4-associated factor 6 isoform X1
  KO
K11795  DDB1- and CUL4-associated factor 6
Organism
crg  Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:crg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:crg04121]
    105343042
Ubiquitin system [BR:crg04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     105343042
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 WD40_like
Other DBs
NCBI-GeneID: 105343042
NCBI-ProteinID: XP_034332847
Position
LG5:21297541..21310554
AA seq 1039 aa
MFKILQDRYYGLDSKQKLYNAAKGNIDFVQRLKLHKKIEVHSGCVNTICWNETGQYLLSG
SDDQHLVISEPWTGKFTSVRSGHRANIFSAKFLPYSNEKIISCSGDGKIYYTDVDTSSRN
NLFDCHFGTTYEVIVIPSESSTFLSCGEDGTVRWFDLRAKTSCVKEDCKEDILINCRRAV
TSIAVNPLIPYELSIACADSSVRIYDRRMLGTKASGSHSSKGILGMTCKFTAPTLSSRPH
RITSLAYSPNGEDILVSYSSEYIYLFGSKDFKTKRLQTPAEFLQKSKHKAERLAKKVKSS
DLFAEKPTKPPPKHKTPEPQHSSRGSRDPPADLPLSSTPPRTSSSPRLSTSEGVTSMLLP
QSPSGSSLRQPPIKRLRLRGDWSDTGPHARPESERHTNEQPDRQTTIMQRMSDMLTRWLD
GNLRRQEEEEREDEVAGRGSEAQASGGQDVSGERSGDVVNEAAPAAEDMDTENTVTTDRR
TQNSTGINQDSSVENQASDTENQDISDRNQDNIHSSDINAQPECDNQDQSSTSSAIQNPR
SLSDPQVTLAENETSVQTRSVGPASRGTANTEENQGISGVRSSVERRGQHVGLLVQEEPV
ISLQYSSEGTTSSTVRLGFARFENLEAGILERSAENASLQPLVREATPTSSRDFESHEAA
EGSEEAKRGDSVGFADSTDSSDIFDSDSFSGESGKEESGEKSENTVFETETNSTAESQRA
EKSSEVLVESESENQPCSSSQADGQTQRAGRRKASAAVKEKIRQIGRMRILERLCRERGS
GLQPDRFTGDSGTSEEEEEEIPVVRGASHSSTHATGEHEEDVEIENRTRTSDHQGNEAAS
SDEEGEGQSRETLERHITAIRLQELYKKRQEERENEEIETRSIHQPLHKIKFKGHRNART
MIKEANFWGDQFVMSGSDCGHIFIWDRYTAKLAMLLEADRHVVNCLQPHPIDPILASSGI
DYDIKLWMPLEENPHFEEERAAEIMRRNEVMLEETRDTITVPAAFMLRVLASLNQIRAGR
ASSSNEPVVENDSSSSDSE
NT seq 3120 nt   +upstreamnt  +downstreamnt
atgtttaagattttacaagacagatattacggattagatagcaaacaaaaactatacaat
gctgctaaaggaaatattgatttcgtacaaagactgaaattacacaagaaaattgaagtt
cattctggatgtgtaaacacgatttgctggaatgaaacgggacaatatctgttatctggg
tcagatgaccaacacctagttatatcagaaccatggactggaaagtttacatctgtaagg
tcaggacacagagccaacatatttagtgccaaattccttccatattccaatgaaaagatt
attagctgctcgggggatggcaaaatctactacacagatgtggataccagctctagaaat
aacttatttgattgtcattttggaacaacatatgaggtgatagtaatccccagtgaatcc
tccactttcctgtcatgtggagaagacggcacggtccgctggttcgacctcagggccaag
acttcctgtgtaaaagaggactgcaaggaggacatcctgatcaactgtaggagagcagtg
acctccattgctgtcaatccgttgattccgtatgaactgagcatcgcctgtgcagacagc
tctgtcagaatttacgaccgaaggatgctgggaactaaagcctcaggttcccacagcagt
aagggaattctgggaatgacctgtaagttcacagcacctactctgtccagcagacctcac
aggattacctcccttgcctacagtcccaatggagaggacattttggtcagctattcctct
gaatacatctatctctttggatcaaaggattttaagacaaaaaggttacagacccctgct
gaatttcttcaaaagtcaaaacacaaagctgagcggctagcaaagaaagtgaaatcgtct
gacttgtttgctgagaaacctacaaagccgcctcctaaacacaaaactcctgagccccaa
cattcctctagaggttccagggatccccctgctgacctcccactgtccagcacccctccc
cgcacctcttcctcccccagattgtccacttctgagggggtcacctccatgttacttcct
caaagtccttctgggtcatcgttacgacaaccaccaatcaaaaggctacgtctacgtgga
gattggtcagacactggacctcatgccagaccggagagtgagcgacatactaatgaacaa
ccagacaggcagaccaccattatgcagaggatgtctgacatgttgacacggtggttagac
ggaaatctgaggcgacaagaggaggaggagagggaagatgaggtcgcagggagggggtct
gaggcccaggcctcgggaggacaggatgtgtcaggggagagaagtggtgatgttgtcaat
gaagcagctccagctgctgaagacatggatacagaaaatacagttaccactgatagaaga
actcaaaattctacaggaataaaccaagactctagtgtagaaaaccaagcctcagacaca
gaaaaccaagatataagtgacagaaatcaggacaatatccacagttcagacattaatgcc
caaccagagtgtgataaccaggaccagagctccacatcaagtgcaatacaaaaccctcgt
agtctttcagatccacaggtgacattagcagaaaatgagacaagtgtgcaaactcgttcc
gtaggacctgcctcaagggggacagcaaacactgaagaaaaccagggtatatcgggggtg
aggagttctgttgaaagaaggggacagcatgtgggactgttagtgcaagaagagcctgtg
attagtcttcagtactcttctgagggtaccactagtagtactgtcagacttggctttgcc
aggtttgaaaatctagaagctggtattctggagagaagtgctgaaaatgcctcattgcag
cctttagttagagaggcaactcccactagtagtagagactttgaaagccatgaagctgct
gaagggagtgaggaggcaaagagaggggattctgtagggtttgcagactccacagacagc
agcgatatttttgacagtgattctttctcaggagagtctggaaaagaggaatcgggagag
aaaagtgaaaatactgtttttgaaactgaaactaattccacagctgaatctcagagagca
gaaaaatccagtgaagttttagtggagtcagagagtgagaaccagccatgcagtagttca
caagcagacggtcaaacacagagagcagggagaagaaaggcgagtgcagcagtcaaggaa
aaaatcagacagattgggaggatgaggatcttagagcgactttgtagggagagagggtca
ggactgcagccggacagattcacaggggacagtgggacgtctgaggaggaagaagaggaa
atacctgttgtaaggggcgccagtcactcgtccactcatgctacaggtgagcatgaagaa
gatgttgaaatagagaacagaacaaggacgtctgatcatcaggggaacgaggcagccagc
tctgatgaggagggggagggtcaaagcagggagactctggagagacacatcaccgctatc
cgactccaggagctgtacaagaaacgtcaggaggagcgggagaatgaagagatagaaacg
aggagtatacaccaaccgctccacaagatcaagttcaaaggtcacagaaacgccagaacc
atgataaaagaagccaatttttggggagaccagtttgtgatgagtgggtcagactgtggc
cacatctttatctgggatcgatacacagccaagctagccatgctgttggaggctgaccga
catgttgtcaattgtctgcagcctcatccaatagatccaattttggcctccagtggtatt
gactatgacatcaaattatggatgccccttgaagaaaaccctcactttgaagaagaaaga
gctgctgagattatgagacgtaatgaggtgatgttagaggaaactcgggataccatcacc
gttcctgccgcttttatgctccgagttctagcatctcttaaccagatcagggcaggacga
gcatcctccagtaatgaacctgtggttgaaaatgacagttcatccagtgattcagagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (57)   

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