KEGG   Crassostrea gigas (Pacific oyster): 105343069
Entry
105343069         CDS       T03920                                 
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg03030  DNA replication
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105343069
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:crg03032]
    105343069
Enzymes [BR:crg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     105343069
DNA replication proteins [BR:crg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    105343069
SSDB
Motif
Pfam: DNA_pol_B zf-DNA_Pol DNA_pol_B_exo1 DNA_pol_alpha_N DNA_pol_B_2 DUF1744
Other DBs
NCBI-GeneID: 105343069
NCBI-ProteinID: XP_034328264
Position
LG4:complement(30010841..30029247)
AA seq 1494 aa
MAPAPEKDDGTNDQDDVQVEQGLAKSRSRREKRDRGGRYAALERLKKVKETGEKHKYDVE
EEKNVYDIVNEDEYSEIVRQRQDDDWIVDDDGAGYVEDGREIFDDDLNEEPGANKGKKEE
KKKSKNPNIVRPGSKPKTTIKSMFAAQSSTGGSKLKSEKDVSLANDDLLGDLMEELHQGP
ADGMMKPLPIKLKKKGFSATKSPLNPFNTNIPSSGAQPVKKKPIIKTEPRAVPIKSEPRS
LPRPNIPDPEDNFDEVDGMDMGMGPAVKQEIVEDLPQSSECQDEAAMMDLNDVDFDEDLG
IKKEETNEKLVKPKKEISIPFETLSTGWEKYQNDSQEESVAEVKVDTSELPLVTSSNGEQ
VLRFYWLDAYEDPYSNPGTVYLFGKVWIEKAKVYVSCCVTVKNIERRIYVLPRSTRKNLK
SVSDTGIDVAMVDVYSEFNEKIAEKFKIPKFKSKKVTKQYAFEKVDVPVESDYLEIRFGA
EIPPLPRDLEGETFSHVFGTHTSCLELLLIDSKMKGPGWVDIKLPQIVNPQVSWCKIEVS
ISKPELLSVVNDQQLTPPPLVVMTLNLRTLPNHKNHQNEIVAATCLVQESFSIDKPAPKN
PFQQHFCVLTKPSDSLFPFDFREKLQKEGKKLRVEMLPNERALMGFLLAKIHKLDPDVIV
GHDIFGFDLDLILHRINANKVPHWSKIGRLKRTKMPKLSGPGHRGFADKTAACGRLVCDI
KLSAKELIRSRSYDLTELANVILKSKRLELDYDQIRNMYMSSQQLLQLLELTLMDSTYIL
RILYELNVLPLALQITSICGNVMTRTLLGGRSERNEYLLLHAFTEKNFIVPDKEYKKTVV
KEAIDDDEAEDGGKGGKSSGRRKPAYAGGLVLDPKKGFYDKYILLLDFNSLYPSIIQEYN
ICFTTVSRNAVQQSDKDDEEPIIELPDKDLEPGILPTEIRKLVESRRQVKQLMKGDISNE
QYMQYDIRQKALKLTANSMYGCLGFSHSRFFAKPLAALITAKGREILMKTKDLVQSMNLD
VIYGDTDSIMINTNCNDIDAVYKVGNKVKSEVNKLYKLLEIDIDGVFKSMLLLKKKKYAA
LSVSKGPDGKYVEHKELKGLDIVRRDWSDLAKEAGNFVVEQILSGETRETIVENIHSKLM
EVGEKVRNGDVPIELYYITKQLTKNPEDYPDKKSLPHVQVALRVNSKGGKKMKAGDTVPY
IICEDGSTLAASQRAYHPEELAKSDTLTVDTKYYLSQQVHPVVSRLCDPIEGTDAAHLAE
CLGLDPSGYKHTARYDEEDEALLNGTEISDEEKYRDCERFKFVCPNPLCGREIIVDAAFT
GAGEWTECAIGVCPNKECKKKLDEYTPYICNRLRMDIRRHVQKYYQGWLKCEDAACGTVT
RRVPLTFQRGHPVCHACHRGLLHPLYTDTMLYTQLCFYEHIFDADKALKSMADGTEKNSA
MTKYKNNETAKELYGQLKDLVSGVIRRNAYSEVNLDKLFQSTFQLKARNHQLTG
NT seq 4485 nt   +upstreamnt  +downstreamnt
atggcgccagcacctgaaaaggacgatggaacaaacgatcaagatgatgtgcaagtagag
cagggattggcgaaatctcgctctcgtagggagaaaagggatagaggaggacgatatgca
gcattggaaaggttaaagaaagtaaaagagacaggagagaaacacaaatacgatgtggaa
gaggaaaagaacgtgtatgacattgttaatgaagacgagtattcagagatagtgcggcaa
cgtcaagatgatgactggattgtggatgatgatggggctggttatgtggaggatggccgt
gaaatctttgatgatgacctcaatgaggagccaggagccaacaaaggaaagaaagaggag
aagaagaaaagtaaaaatcccaacattgtgcgtcctggatccaaacccaaaaccaccatc
aagtctatgtttgctgcccagtcctccacagggggatcgaagctaaagtctgagaaagat
gtttcattggctaatgatgatttgctgggagatctgatggaggaacttcatcaggggccc
gctgatggcatgatgaaaccgttacccatcaagctgaagaagaaaggattcagtgccaca
aaatctcccttgaatccattcaacaccaacataccatcatcaggagcacaacctgtgaaa
aagaaaccaataatcaagacagagccacgagcagtccccatcaagtcggaacctcgttct
cttccaagacccaacatccctgaccctgaggacaattttgatgaggtagatggaatggac
atggggatgggaccagcagtaaagcaagaaattgtcgaggacctcccacagtcatctgaa
tgtcaagatgaagcagccatgatggatctgaatgatgtagactttgatgaagatcttggt
atcaagaaagaagaaactaatgagaaattggtcaaaccaaaaaaggaaatatccatccca
tttgaaacactgtctacaggatgggagaaatatcaaaatgactctcaggaggaatctgtg
gcagaggtcaaagttgacacatcagagctgccattggttacttcatctaatggggaacaa
gtcctgcgattctattggctggatgcttatgaagatccatatagcaatccaggcactgtt
tacttatttggaaaggtttggatagagaaagccaaagtctatgtgagctgttgtgtgact
gtgaagaatatagagaggagaatatatgtacttcccagatcaacaagaaagaacctgaag
tctgtctctgacactgggatagatgtcgccatggttgatgtgtactctgagttcaatgag
aaaatagcggaaaagttcaagataccaaagttcaagtccaagaaagtcaccaagcagtat
gcatttgagaaggtcgatgttccagtggagtctgattatttagagatcagatttggggca
gagattccaccattaccaagggatttggaaggagagacgttcagccatgtatttggcacg
catacatcatgtttggagcttttgctgattgattccaaaatgaaaggacctggatgggtg
gatataaagcttcctcagatagtaaacccccaagtcagctggtgtaaaatagaggtcagc
atcagtaagcccgagttgttgtcagttgtgaacgaccagcagctgaccccgcctcctctt
gtcgtcatgacgttaaaccttaggaccctccccaatcacaaaaatcaccaaaatgaaatt
gtagcagccacctgtcttgtccaggaatctttcagtatcgataaacctgcgccgaaaaat
ccattccaacaacatttctgtgttttaacaaaaccaagtgatagtctttttccatttgac
tttcgagagaagcttcaaaaagagggaaagaaattaagggttgaaatgcttcccaatgaa
agagctttaatgggatttcttttggccaagattcataaattagacccagatgtcattgtg
ggacatgacatctttggatttgacttagatttgatcctccatagaataaatgccaacaaa
gttcctcattggtcgaaaattgggagactcaaaagaaccaaaatgccaaaattatcggga
cccggtcaccgagggtttgctgataaaacagcagcctgtggtcgattagtgtgtgacatc
aaattgtcagccaaggaactcatcagatcccggagttacgacctcacggaacttgccaac
gttatactgaagtccaagagactagagttagactatgatcagatacgcaacatgtacatg
tcatcacaacagttacttcagttactcgagttaacgttgatggattctacatacattttg
cgaattctgtacgagttaaatgtgcttcctttggctcttcagattaccagcatctgtgga
aatgtgatgacaagaactttactcggagggcgatcagagagaaatgagtatctactgctg
catgccttcacagagaaaaatttcatagttcctgataaagagtacaaaaagacggtagtg
aaagaggcaatcgatgatgacgaagcagaggatggtgggaagggaggtaaatccagcggt
cgacggaaacctgcctatgctgggggtcttgttttggaccccaagaaaggattctatgac
aagtacatcttgttgctggactttaacagtctctacccctccattatacaagagtacaac
atctgtttcaccacagttagcagaaacgctgttcagcagagtgacaaggatgatgaggag
ccaataatagagctacctgacaaagacctggagcctggcatcctgccaacggagatcagg
aaactggtggagagcagacggcaggtcaaacagctgatgaagggcgacatctccaacgaa
caatacatgcagtatgacatcagacagaaagctctgaagctaactgcaaacagtatgtac
ggttgtctgggatttagccactccaggttctttgccaaacctttagcagcacttattaca
gcaaagggtagagagattctgatgaagacgaaagacttagtgcaatctatgaatctagac
gtaatctatggagacacagactccatcatgatcaacactaactgcaacgacattgatgct
gtctataaagtcggcaataaggtgaagtctgaggtgaacaagctgtacaagctgttggag
atcgacattgatggagtgttcaagtccatgttgttgctgaagaaaaagaagtacgctgca
cttagtgtctccaaaggaccggacggaaagtacgtggagcacaaggaactgaaggggttg
gacatcgtccgcagggactggagtgacctagccaaagaggcaggaaactttgttgtggaa
caaattttgtcaggagaaactcgggaaacaattgttgaaaacattcatagcaaactgatg
gaagttggagagaaagttagaaatggtgatgttccaatagaattgtactacattactaag
caactcacaaaaaatcctgaggattacccagacaagaaaagtctacctcacgttcaagta
gctctgagagtcaacagtaaaggaggaaagaaaatgaaggcaggagacacggtgccctac
atcatatgcgaggatggttcaaccttggcagcatcacagagagcatatcatcccgaagag
ctagccaagagtgacaccctcacagtcgacactaagtactacctctcccagcaagtccac
cccgttgtgtccaggctgtgtgatccgatagagggcacggacgctgctcatctggccgag
tgtttaggtctggacccatcaggttacaaacatacagccagatatgatgaagaggatgaa
gctttgctcaatggaactgaaatttctgatgaagagaaatacagagactgtgagagattt
aagtttgtgtgtcccaacccattatgtggtcgagaaattattgtagatgctgccttcact
ggagctggggagtggacggaatgtgcaattggtgtttgtccaaataaggaatgcaagaaa
aaactagatgagtatactccctacatctgtaacagactacgcatggacattagaagacac
gtacagaaatattaccaggggtggctaaaatgtgaagacgcggcatgtggaacagtgacc
agaagagttcccctgaccttccagagaggtcatcctgtgtgccacgcctgtcatcggggt
ctcctccacccactgtatacagacaccatgttgtacacacagctctgcttttatgaacac
atctttgatgctgataaagctctcaagtccatggcagatggcacagaaaaaaattcagct
atgacaaaatacaaaaataatgaaacagcaaaggaactgtatgggcagctgaaagacttg
gtgtctggagtgataaggagaaacgcgtactcggaagtcaatttagacaagttattccag
agcacttttcaactcaaagcaagaaatcaccaattgactggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (158)   
   KEGG ORTHOLOGY (1)   
   RefGene (154)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (174)   

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