KEGG   Crassostrea gigas (Pacific oyster): 105344277
Entry
105344277         CDS       T03920                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase isozyme L5
  KO
K05610  ubiquitin carboxyl-terminal hydrolase L5 [EC:3.4.19.12]
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105344277
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:crg01002]
    105344277
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:crg04121]
    105344277
Enzymes [BR:crg01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     105344277
Peptidases and inhibitors [BR:crg01002]
 Cysteine peptidases
  Family C12: ubiquitin C-terminal hydrolase family
   105344277
Ubiquitin system [BR:crg04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UCH
    105344277
SSDB
Motif
Pfam: Peptidase_C12 UCH_C
Other DBs
NCBI-GeneID: 105344277
NCBI-ProteinID: XP_011450320
UniProt: K1PX47
Position
LG7:complement(54249659..54271690)
AA seq 318 aa
MATSAGDWCLIESDPGVFTELIRGFGCEGLQVEELWSLDSTSFENLKPVYGLIFLFKWQP
ESEPEGTIVQDSRIEKIFFAKQVINNACATQAILSVLLNCPESDVKVGPTLAQFKEFAQA
FDPALRGLTLSNSDTIREVHNSFSRQQMFEFDEKAAKKDDDVFHFVSYLPIDGRLYELDG
LKEGPVDLGAIPSDTDWLDVVRPVLEKRMQKYSTDEIHFNLMAIVSDRKAMYQKRLQELQ
SRGMEVEEDQLEMSQLMVKIQEEDAKMKRYKVENVRRKHNYLPFIMELLKILAEQKQLLP
LVEKAKEKAAKKKSEEVK
NT seq 957 nt   +upstreamnt  +downstreamnt
atggctacgagtgcaggggactggtgtttgatagaaagcgacccaggggtttttacggaa
ctcattagaggatttggttgtgaggggcttcaagtagaagagttatggagtttagattct
acgagttttgaaaatctcaaaccggtgtatggcctgatattcttatttaaatggcagccg
gaatctgaaccagagggaacaattgttcaggacagtcgcattgagaaaattttctttgca
aagcaggttataaacaatgcctgtgctacacaggcaatcctaagtgttcttttgaactgt
ccagagagtgatgtcaaagtaggtccgaccttggcccagtttaaagagtttgcccaggct
tttgaccctgctctacggggactgactctcagcaactcggacactattcgtgaggtacac
aacagtttctcaagacagcagatgtttgagtttgatgagaaggcggccaaaaaggatgac
gatgtgttccactttgtgagttatctccccattgatgggcggctgtacgaattggacgga
ctcaaagagggaccagtagacttaggtgccattccttcagacacagattggctggatgtg
gtcaggcctgtattggagaaaaggatgcaaaaatacagcacagatgaaattcactttaac
ctgatggctatagtgtctgataggaaagccatgtaccagaagaggctgcaagagctacaa
tcgcggggtatggaggtcgaggaggaccagctggagatgagtcagctgatggtcaaaatc
caggaggaggatgctaagatgaagagatacaaggttgaaaatgtgagaaggaaacacaat
tacctcccttttattatggaacttctgaagatattagcagaacagaagcagttactgccc
ttagtagaaaaggcaaaagaaaaagcagctaaaaagaagtcagaggaagtaaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (127)   
   KEGG ORTHOLOGY (1)   
   RefGene (123)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (139)   

Download RDF
DBGET integrated database retrieval system