KEGG   Carnobacterium sp. 17-4: CAR_c09350
Entry
CAR_c09350        CDS       T01452                                 
Symbol
comEB
Name
(GenBank) enzyme associated to DNA transport (competence)
  KO
K01493  dCMP deaminase [EC:3.5.4.12]
Organism
crn  Carnobacterium sp. 17-4
Pathway
crn00240  Pyrimidine metabolism
crn01100  Metabolic pathways
crn01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:crn00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    CAR_c09350 (comEB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:crn02044]
    CAR_c09350 (comEB)
Enzymes [BR:crn01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.12  dCMP deaminase
     CAR_c09350 (comEB)
Secretion system [BR:crn02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   CAR_c09350 (comEB)
SSDB
Motif
Pfam: dCMP_cyt_deam_1 MafB19-deam Bd3614-deam KNOX1 Churchill
Other DBs
NCBI-ProteinID: AEB29628
UniProt: F4BPU3
Position
962192..962710
AA seq 172 aa
MNMTERIPWDQYFMSQSLLLSLRSTCARLTVGATIVREKRIIAGGYNGSVSGDAHCIDDG
CYIVDGHCLRTIHAEMNAILQCAKFGAQTEGAEIYVTHFPCLQCTKMIIQAGITKINYLE
DYHNNDYALKLIEQAHVQCQKVVLPKDFFQQLDFNTNAQTSLSQLNGRMPFQ
NT seq 519 nt   +upstreamnt  +downstreamnt
atgaatatgactgaacgtataccatgggatcaatattttatgtctcagagtttgttgctg
tctttacgaagtacatgtgctcgattaactgttggagctacaattgtaagggaaaaaaga
attattgcaggaggttacaacggttcggtaagtggggatgcacattgtatagatgacggt
tgttatattgttgacggtcattgtttacgtacgatccatgctgagatgaatgcgattctt
caatgtgcaaaatttggagcgcaaactgaaggtgcagaaatttatgttactcattttccc
tgtttacagtgtacgaaaatgattattcaagcgggaattacaaaaataaattatttagag
gattatcataataatgattacgctttaaaattgattgaacaagcccacgttcaatgtcaa
aaagtagtgcttccaaaagattttttccaacaactagatttcaatacgaatgctcaaact
agtttaagccaacttaatggacgcatgccattccaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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