KEGG   Citrobacter rodentium: ROD_04231
Entry
ROD_04231         CDS       T01145                                 
Symbol
ddlA
Name
(GenBank) D-alanine:D-alanine ligase A
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
cro  Citrobacter rodentium
Pathway
cro00470  D-Amino acid metabolism
cro00550  Peptidoglycan biosynthesis
cro01100  Metabolic pathways
cro01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:cro00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    ROD_04231 (ddlA)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    ROD_04231 (ddlA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    ROD_04231 (ddlA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cro01011]
    ROD_04231 (ddlA)
Enzymes [BR:cro01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     ROD_04231 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:cro01011]
 Precursor biosynthesis
  Amino acid ligase
   ROD_04231 (ddlA)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 ATPgrasp_ST ATP-grasp_3 ATP-grasp_4 RimK NHase_alpha GARS_A
Other DBs
NCBI-ProteinID: CBG87204
UniProt: D2TKW3
Position
complement(474479..475573)
AA seq 364 aa
MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFEVVLLGIDKQGQWHVSDAANYLLN
ADDPAHIALRPSATRLAQVPGQHEHQLIDARTATPLPTVDVIFPIVHGTLGEDGSLQGML
RVANLPFVGSDVLGSAACMDKDVTKRLLRDTGLNIAPFVTLSRANRHTFSFADIKARLGL
PLFVKPANQGSSVGVSKVTNEAQYAQAVALAFEFDHKVVVEQGIVGREIECAVLGNDRPQ
ASTCGEIVLNSDFYAYDTKYIDDNGAKVVVPATIDPQINDKIRDIAIQAYQTLGCAGMAR
VDVFLTAENEVVINEINTLPGFTNISMYPKLWQASGLSYTDLISRLIELALERHAADNAL
KTTI
NT seq 1095 nt   +upstreamnt  +downstreamnt
atggcgaaattgcgggtaggaatcgtatttggcgggaaatcagcggaacatgaggtgtct
ttgcaatcggcaaaaaatattgtcgatgccatcgacaagacccgctttgaggttgtgctg
ttaggtattgataaacaggggcagtggcacgtcagcgatgcggccaactacctgctcaac
gcggacgatcccgcgcacattgcgctgcgtccttccgccacccgtcttgcccaggtgccg
ggtcaacatgaacaccagcttattgatgcccggaccgccacgcccctgccgacagtggat
gtgatattcccaatcgtccacggtacgctgggcgaagatggttcgctacaggggatgctg
cgggtggcgaatctgccgttcgtcggttccgatgtgctgggctcggcggcttgcatggac
aaagatgtgactaaacgcctgctgcgcgacaccgggctgaatattgcgccattcgtgact
ctcagccgggccaatcgccatacttttagctttgccgatataaaagcgcgtctcggcctg
ccgctgttcgtgaagccagccaaccagggctcttccgtcggtgtcagtaaagtgaccaac
gaggcgcagtacgcccaggccgtcgcgctggcgttcgaattcgatcataaggtagtggta
gaacaagggatcgtcgggcgcgaaattgaatgcgcggtgctgggtaacgatcgtccacag
gccagtacctgcggcgaaatcgtgctgaacagcgatttttacgcttacgacaccaaatac
atcgacgataacggtgcgaaagtggtggtgcctgcgacgatcgatccgcagatcaacgac
aagatccgtgatattgccatccaggcttaccagacgctgggctgtgccggtatggcgcgc
gtcgatgtctttttgaccgcggaaaatgaagtggtgatcaatgagatcaacacgctgccg
ggctttaccaacatcagtatgtacccgaaactctggcaggccagcgggttaagctatacc
gatctgatcagccgtttgattgaactggcgctggagcgacacgctgcggataacgcgctg
aaaacgacaatctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (29)   

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