KEGG   Citrobacter rodentium: ROD_36311
Entry
ROD_36311         CDS       T01145                                 
Symbol
uvrA
Name
(GenBank) UvrABC system protein A (excinuclease ABC subunit A)
  KO
K03701  excinuclease ABC subunit A
Organism
cro  Citrobacter rodentium
Pathway
cro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ROD_36311 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cro03400]
    ROD_36311 (uvrA)
DNA repair and recombination proteins [BR:cro03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ROD_36311 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ROD_36311 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase AAA_23 DnaJ_CXXCXGXG AAA_25 Viral_helicase1 NACHT cobW ExoX-like_C ScfRs
Other DBs
NCBI-ProteinID: CBG90339
UniProt: D2TRS7
Position
3823786..3826608
AA seq 940 aa
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPVIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRDDLSTRLAESFETTLELSGGTAVVADMDDT
KAEEMLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPDL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVDAPWASLSANVHKVVLYGSGKESIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH
VFVENTPLPAISDMSIGHAMDFFNNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLAAIMAVPESLTGQYMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLRDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
ALNGATITEPAPYRDVQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
ARSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaacatcaacctcgtt
atcccccgcgacaaactgattgtcgtgaccgggctttcggggtctggcaaatcctcgctc
gctttcgacaccctgtatgccgaagggcagcgtcgttacgttgaatccctttccgcctat
gcgcgtcagtttctgtcgctgatggaaaagccggatgtcgatcatattgaggggctgtcg
cccgctatctcaatcgagcaaaaatcgacgtcgcataacccacgctccaccgtcggcacc
attaccgagatccacgactacctgcgtctgctgttcgcccgcgtcggcgaaccgcgctgt
ccggaccacgacgttccgctggcggcgcagacggtgagccagatggtcgacaatgtgctt
tcgcagcctgagggcaaacgcctgatgctgctggcgccggtgatcaaagagcgcaaaggc
gagcacaccaaaacgctggaaaacctggcaagccagggctatatccgcgcccgtatcgac
ggcgaagtgtgcgatctctccgatccgccaaagctggagctgcaaaagaaacataccatc
gaggtggtgatcgatcgcttcaaagtgcgcgacgatctcagcacccgcctggcggaatcg
tttgagaccacgctggagctttccggcggaacggcggtggttgccgatatggacgatacc
aaagcggaagagatgctcttttccgccaacttcgcctgcccgatttgcggctacagcatg
cgcgaactggaaccgcgcctgttctcgttcaacaacccggcgggcgcctgcccgacctgc
gacggcctcggcgtgcagcagtatttcgatccggatcgcgtgatccagaatccggatctg
tcgctggccggcggcgcgatccgcggctgggatcggcgcaacttttattatttccagatg
ctgaaatcgctggcggagcactataagttcgacgtggacgcgccgtgggcaagcctgagc
gccaacgtgcacaaagtcgtgctgtacggttccggcaaagagagcattgagttcaaatac
atgaacgatcgcggcgacacctccgtgcgccgccacccgttcgaaggcgtgctgcataac
atggagcgccgctataaagagacggaatccagcgcggtacgtgaagagttagcgaagttc
atcagcaatcgtccgtgcgccagctgcgaagggacgcgtctgcgtcgtgaagcgcgccac
gtctttgtcgaaaatacgccgctaccggccatttccgacatgagcatcggccatgcgatg
gacttcttcaacaatctcaaactttccggtcagcgggcgaaaattgccgagaaagtgctg
aaagagattggcgatcgcctgaagtttcttgtcaacgtcggcctgaactacctgacgctt
tcccgctcagcggagacgctctccggcggcgaagcgcagcgtatccgcctggcaagccag
attggcgctggcttagtcggcgtaatgtacgtgctggatgagccgtcaatcggcctccac
cagcgcgacaacgagcgtctgctgggtacgctgattcacctgcgcaacctcggcaatacc
gtgattgtggtcgagcacgatgaagatgcgattcgcgccgccgaccacgtgatcgatatc
ggtccgggcgcaggcgttcacggcggcgaagtggtggccgaaggcccgctggccgcgatt
atggcggtgccggaatcgcttaccggacagtatatgagcggcaagcgtaaaatcgaggtg
ccgaagcagcgtgtgcccgctaatccggaaaaagtactgaagctgaccggcgcgcgcggc
aataacctgagagacgttacgctgacgctgccggtgggcctgttcacctgcatcaccggc
gtatccggttccgggaagtcgacgctgatcaacgatacgctgttcccgattgcccagcgc
gcgctgaacggcgcgactatcaccgaaccggcgccgtaccgcgacgtgcagggactggaa
catttcgacaaggtgatcgatattgatcagagcccaatcgggcgtaccccgcgttccaac
ccggccacctataccggcgtgtttacgccggttcgcgagctgtttgccggcgtaccggaa
gcgcgctcgcgcggctatacgccgggtcgtttcagctttaacgtgcgcggcggacgctgt
gaagcctgtcagggcgacggggtgatcaaagtggaaatgcacttcctgccggatatttac
gtcccgtgcgatcagtgcaaaggcaaacgctataaccgcgaaacgctggagattaaatac
aagggtaagaccatccacgaagtgctggatatgaccatcgaagaggcgcgtgaattcttt
gatgcggtgcccgcgctggcgcggaagctgcaaacgctgatggatgtcggcctgacctac
atccgtctcggccagtccgccaccacgctttccggcggcgaggcccagcgcgtgaagctg
gcgcgcgagctgtcaaagcgcggtaccggccagacgttgtacattctggacgagccgacc
accggtctgcacttcgccgatatccagcaactgctggacgtgctgcatcagctacgcgat
cagggcaataccatcgtggtcattgaacacaacctggacgtgattaagaccgcggactgg
attgtcgatctcggtccggaaggcggcagcggcggcggggaaattctcgtctccggcacg
ccggaaaccgtggcggaatgtgaagcctcacacaccgcgcgcttcctgaaaccgatgctc
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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