KEGG   Campylobacter rectus: CRECT_1806
Entry
CRECT_1806        CDS       T06768                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
crx  Campylobacter rectus
Pathway
crx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:crx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CRECT_1806 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crx03021]
    CRECT_1806 (rpoC)
   03400 DNA repair and recombination proteins [BR:crx03400]
    CRECT_1806 (rpoC)
Enzymes [BR:crx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CRECT_1806 (rpoC)
Transcription machinery [BR:crx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CRECT_1806 (rpoC)
DNA repair and recombination proteins [BR:crx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CRECT_1806 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Peptidase_M23 RPOC_hybrid
Other DBs
NCBI-ProteinID: QCD47431
UniProt: A0A6G5QP71
Position
complement(1904042..1908550)
AA seq 1502 aa
MSELKPIEIKEERRPRDFEAFQLRLASPEKIKSWSHGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRYKGIKCEKCGVEVTSSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGIKMKDLERVLYYEAYIVESVGDAFYDAENSKKVEIFDVLNEEQYVSLASR
FEESGFRARMGGEVIRDMLANIDLVELLNTLKDEISATNSEAKKKTIVKRLKVVESFLNS
GNRPEWMMITNLPVLPPDLRPLVSLDGGKFAVSDVNDLYRRVINRNARLKRLMELDAPEI
IIRNEKRMLQESVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFS
GRSVIVVGPKLRMDQCGLPKRMALELFKPHLLARLEEKGYATTVKQAKKMIEDKTNEVWE
CLEEVVKDHPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHV
PLSQEAIAECKILMLSSMNILLPASGKAITVPSQDMVLGIYYLSLEKTDSKGANKIFASV
DEVMIAEEAHCLEVHSKIKTMIDGKTLFTTAGRLIIRSILPDFVPENMWNRVMKKKDIAN
LVDYVYKNGGLEVTAGFLDKLKNLGFRYATKAGISISIADIIVPDSKQKYINEAKKKVRE
IQNQYGAGLLTDSERYNKIIDIWTDTNNVVAGEMMKLIQGDRGGFNSIYMMADSGARGSA
AQIRQLAGMRGLMAKPDGSIIETPIISNFREGLNVLEYFNSTHGARKGLADTALKTANAG
YLTRKLIDVAQNVKVTMHDCGTHEGVEITEITENGELIESLEERILGRVLADDVIDPITN
EVLFSEGTLIDEEKAKVVSEAGIKSISIRTPIACKAAKGVCAKCYGVNLGEGKLVKPGEA
VGIISAQSIGEPGTQLTLRTFHIGGTASTEQQDYQVVAQKEGFIRYYNLNVYENGGKKIV
ANRRNSAVLLVEPKIKAPFDGKIEIEIAHEDVNIIVKGKKEERKYTLRRSDLAKPNELAG
VSGKVEGKIYIPYVGGDTVKENESIAEVIKEGWNVPNRIPFASEIKVEDGEPIAKKIPAG
ANGVLKFYILKGDYLERVKNVKKGHVVSEKGLFVVVADEDDREAVRHYIPRNSIIKANDS
DIVDSKAIISEPESYEKTVIAEWDPYSTPIIAEAAGKVTYEDIEPGYSAAEQYDEATGQS
RLVINEYLPSGIKPTIVISTDEGKIIRYQLEPKTAIFVGNDEAVKQADILAKTPKAVAKS
KDITGGLPRVSELFEARRPKNTAIIAEIDGTVRFEKPLRSKERIVIEADDGATAEYLIDK
TRQIQVRDGEFIHAGEKLTDGLISSHDVLRILGEKALHYYLISEIQQVYRSQGVAIADKH
IEIIVSQMLRQVKIVDSGDTNFITGDMISRTRFKEENERIMRMGGNPAIAEPILLGVTRA
AIGSDSVISAASFQETTKVLTEASIAAKIDHLEDLKENVILGRMIPVGTGLYQDQKIKLK
QN
NT seq 4509 nt   +upstreamnt  +downstreamnt
atgagtgagttaaaacctattgagataaaagaagaacgcagaccgcgcgatttcgaggcg
tttcagcttcgtttggccagccccgaaaagataaaatcatggagccacggcgaggtaaaa
aaacccgaaactataaactaccgcacgctaaaacccgagcgcgacggcttattttgcgct
aaaattttcggtcccattcgcgactacgagtgtctttgcggtaagtataaaaaaatgcgc
tacaaaggcatcaagtgtgaaaaatgcggcgtcgaggtaaccagctcgaaagtgcgccgc
tcaagaatgggtcatatcgagcttgtgactcctgtcgcgcacatttggtatgtaaattcg
ctcccgagccgcataggaacgttgcttggcataaagatgaaggatttggagcgcgtgctt
tactacgaggcatacatcgtcgagtctgtcggcgacgcgttttacgatgccgaaaatagc
aaaaaagttgaaattttcgacgttttaaacgaagagcaatatgtctctttggcttctcgt
ttcgaagagagcggatttagggccagaatgggcggcgaagttatccgcgatatgctagcc
aatatagatttggtcgagcttttaaatactttaaaagacgagataagcgctacaaattcg
gaagccaagaaaaaaactatagtaaaaagattaaaagtcgtcgagagctttttaaattcg
ggcaaccgtcctgagtggatgatgatcacgaatttgccggtgcttccgcccgatcttagg
ccgctcgttagccttgacggcggcaaatttgcagtttctgatgtaaatgacctatatcgc
cgcgttatcaacagaaacgcgcgcttaaaacgccttatggagcttgacgcgcctgagatt
atcatcagaaacgaaaagcgtatgcttcaggaatccgtagatgcgttatttgacaacgga
cgacgcgcaaatgcggtaaaaggcgcaaacaaacgcccgctaaaatcgctttctgagatc
attaaaggcaagcaaggccgcttccgtcaaaatttgctcggtaagcgcgtggatttttcc
ggtcgttcagttatcgtcgtcggaccaaagctacgtatggatcagtgcggactgccgaaa
agaatggcacttgagctgtttaagccgcatttgctggctcgcctcgaggagaagggctac
gctacgaccgtaaaacaagctaaaaagatgatagaggataagacgaatgaggtttgggag
tgcctagaggaggtcgttaaagatcatccggtcatgctaaaccgtgctccgacgcttcac
aagctatctatccaggcatttcacccggtgctcgtcgaaggcaaggcgatacagctgcat
ccgctggtttgcgccgcatttaacgcggactttgacggcgaccagatggccgtgcacgtg
ccgctatcgcaggaagcgatcgccgagtgcaaaattttaatgcttagctcgatgaatatc
ttgcttcctgcaagcggtaaggctatcacggttcctagccaggatatggttttgggaatt
tactacctaagcctagaaaagaccgacagcaaaggcgcaaataaaattttcgcgtccgtc
gatgaagtaatgatcgccgaggaagcccactgcttagaggtgcactcgaaaatcaaaacg
atgatcgacggcaagacgctatttacgactgcgggtcgcttgatcatccgctcgattctg
cctgattttgttcctgaaaatatgtggaacagggttatgaagaaaaaagatatcgcaaat
ttggtcgattacgtctataaaaacggcggccttgaggtaacggcgggatttttggacaag
cttaaaaatttgggtttccgatacgcgaccaaggccggtatctcgatctctatcgccgat
atcatcgtgcccgatagcaaacaaaaatatatcaacgaggccaagaaaaaggtccgcgag
atacaaaatcaatacggcgcgggcttgctaaccgactccgagagatacaataaaatcatc
gatatctggacggatacgaacaacgtcgtcgcaggcgagatgatgaagctcatccaaggc
gacaggggcggatttaactctatttatatgatggccgacagtggcgcgagaggctctgcg
gctcaaattcgccagctagccggtatgcgcggtcttatggcgaaaccggacggctcgatc
atcgagactccgatcatatcaaatttccgcgaaggcctaaacgttcttgagtactttaac
tcaacccacggtgcgagaaaaggacttgccgataccgcgctaaaaacggcgaatgcggga
tatctaaccagaaagctgatcgacgtcgcgcaaaatgtgaaagtgactatgcacgactgc
ggcacccacgagggcgtcgagataaccgagatcaccgaaaacggcgagctgatcgaaagc
ctggaggagagaattttaggtcgcgtgctggccgatgacgtgatcgatccgataacgaac
gaagtgctatttagcgaaggtaccttgatagacgaggaaaaagccaaggtcgtaagcgaa
gcgggtataaaatcgatcagtatcagaacgcctatagcctgcaaagccgcaaaaggcgtc
tgcgcgaagtgctacggcgtaaatttgggtgagggcaagctggtaaaacccggcgaagcc
gtcggcatcatctcggctcaatctatcggcgaaccgggcactcagctaacgctaagaacc
ttccatatcggcggtacggcatcgaccgaacagcaagactaccaagtcgtcgcgcaaaaa
gagggctttataaggtattataatctaaatgtttatgaaaacggcggcaaaaaaatcgta
gcaaatcgcagaaactccgccgtcttgctcgtcgagcctaagatcaaagctccgtttgac
ggtaaaatcgaaatcgagatcgctcacgaggatgtaaatatcattgtaaaaggcaaaaaa
gaagagagaaaatacacgctaagaagaagcgatctggctaaaccaaacgagctagctggc
gttagcggcaaggttgagggtaaaatttacatcccttacgtaggcggcgacacggtcaaa
gaaaacgaaagcattgccgaggtcatcaaagaaggctggaacgtgcctaatcgtattccg
tttgccagcgagataaaggtagaagacggtgagcctatcgctaaaaaaatccctgccggc
gcaaacggcgtgcttaaattttacatcttaaagggcgattatttagagcgcgtcaaaaat
gtcaaaaaaggtcacgtcgtgagcgaaaaagggctgtttgtcgtggtcgccgacgaggac
gacagggaagcggttcgccactatataccgcgaaattctatcatcaaggcaaacgatagc
gatatcgtggatagcaaagccattatctccgagcccgaaagttacgagaaaaccgttatc
gccgagtgggatccgtattctacgcctatcatcgccgaggccgcaggtaaggtaacgtac
gaggatatagagccgggatatagtgcggcggagcaatacgacgaagcgacggggcaaagc
cgtctggtcatcaacgaatacttgccttcgggtatcaagcctacgatcgtgattagcacc
gatgaaggcaaaataatccgctatcagctggagccgaaaaccgcgatattcgtaggtaac
gacgaggcggtgaagcaggcagatatcttggccaaaacgcctaaagccgtcgcgaaatca
aaagatatcacgggcggtttgccgcgagtttccgagctatttgaggctagacgcccgaaa
aataccgctatcatcgccgagatcgacggcaccgtgaggtttgaaaagccgcttcgctcc
aaagagcgcatcgtgatagaggccgacgacggcgcaacggcggagtatctgatagacaaa
actcgtcaaattcaggttcgcgacggcgaatttatccatgccggcgagaagctaaccgat
ggactaatatcaagccacgatgttttgagaattttgggcgaaaaggcgctgcactattat
ttgatcagcgaaattcagcaagtttaccgctctcaaggcgttgcgattgccgacaagcac
atcgagatcatcgtctctcagatgcttcgtcaggtcaagatcgtcgatagcggcgatacg
aatttcatcacgggcgatatgatctctcgaacgagatttaaggaagaaaacgagcgcata
atgcgaatgggtggcaatcctgcgatcgccgagcctattttgctgggcgttacgcgcgct
gctatcggaagcgatagcgtcatctcggcggcatcgttccaagagacgaccaaggtgcta
accgaggcttcgatcgcagccaagattgatcacctcgaggatctaaaagaaaacgtgatt
ttaggccgtatgatccctgtaggaacgggtctttatcaagatcaaaagatcaagctaaaa
caaaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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