KEGG   Chromobacterium rhizoryzae: D1345_03620
Entry
D1345_03620       CDS       T05688                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
crz  Chromobacterium rhizoryzae
Brite
KEGG Orthology (KO) [BR:crz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crz03021]
    D1345_03620 (rpoS)
Transcription machinery [BR:crz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D1345_03620 (rpoS)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AXT45331
Position
complement(828504..829451)
AA seq 315 aa
MSSELDILEEQEILDEESNEEAVAEVEAEEVGEAQPVYEEVADVTQIYLNDIGNNALLTP
QEELALARRVVAGEFEARQKMIEHNLRLVVNIAKHYINRGLALLDLIEEGNIGLMHALEK
FDPERGFRFSTYATWWIRQSIERAIMNQSRTIRLPVHVIKELNVYLRASRHLESQIGREP
TLDEIAHLVGKPVDDVRKVMNLNERMASLDAPLDIDPMLSIGESIPDEQHDEPEIQLHNS
QLEHFVHEWLGQLNEKQKLVIERRYGLNGYEICTLEELAAALSLTRERVRQIQIEGLEQL
RRILRRKGISKDFLL
NT seq 948 nt   +upstreamnt  +downstreamnt
atgagtagcgaactcgacattctcgaagagcaagaaattctcgacgaggaaagcaatgag
gaagctgttgctgaagtggaggcagaggaagtcggcgaagcgcagccggtatacgaagaa
gttgccgacgtcacccaaatctacctcaacgatatcggcaacaacgctctgttgacgccg
caggaagaactggctctggcccgccgcgtggtggccggcgagttcgaagcgcggcaaaag
atgatcgaacacaatctgcggctggtggtgaacatcgccaagcattacatcaaccgcggc
ctggcgctgctggatctgatcgaggaaggcaatatcggtctgatgcacgcgctggagaag
ttcgatccggagcgcggcttccgcttctccacctatgccacctggtggattcgccagagc
atagaacgcgccatcatgaatcaatctcgcaccatccgcctgccggtgcatgtgatcaag
gagctcaacgtttatctacgcgcctcgcgccatctggaaagccagatcggccgcgagccg
acgctggatgaaatcgcccatctggtgggcaagccggtggacgatgtgcgcaaggtgatg
aacctcaacgagcgcatggcctcgctggacgcgccgctggatatcgacccgatgctgtcg
atcggcgagtccattccggacgagcagcatgacgagccggaaatccagttgcacaacagc
cagttggaacacttcgtccatgaatggctgggccaactgaacgagaagcaaaaactggtg
atcgagcgccgctacggcctcaacggctacgagatctgcacgctggaagagttggccgcc
gcactgagcctgacccgcgaacgcgtgcgccagatccagattgaaggcctggaacaacta
cgccgcatcctgcgccgcaagggcatctccaaggactttctgttgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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