KEGG   Chromohalobacter salexigens: Csal_1000
Entry
Csal_1000         CDS       T00347                                 
Name
(GenBank) sarcosine oxidase, alpha subunit family
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
csa  Chromohalobacter salexigens
Pathway
csa00260  Glycine, serine and threonine metabolism
csa01100  Metabolic pathways
Module
csa_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:csa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Csal_1000
Enzymes [BR:csa01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     Csal_1000
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     Csal_1000
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C Pyr_redox_2 FAD_oxidored Pyr_redox_3 FAD_binding_2 NAD_binding_8 GIDA HI0933_like DAO FAD_binding_3 Pyr_redox Thi4 AlaDh_PNT_C Lycopene_cycl
Other DBs
NCBI-ProteinID: ABE58357
UniProt: Q1QYV1
Position
1126172..1129231
AA seq 1019 aa
MSQTASQSNRLAQGGQVDRTQTLTFTFNGRTYTGHPGDTLASALLANGVDLVNRSFKYSR
PRGTVAAGAEEPNAVVQLGATEATQVPNVRATQQALYDGLVASSTNGWPDAQRDIMRWVG
KLGSPFMPPGFYYKTFMAPASMWMTYEKYIRKTAGLGRSPTQPDPDIYDHMHRHCDLLVV
GAGPAGLSAALAAARAGARVILADEQETMGGSLLDTRETLDDQPAAQWLKTTLAALAEHD
NVTLLPRTTAHGYHDHHFVTLHERRTEHLGDSAPSQDGHRQARSRLHRVRAGQVILATGA
HERPLVYANNDVPGNLLAGAVSTYIRRYGVVPGQKLVLSTSNDHAYRAALDWQEAGREVA
AIVDARTAPEGDLVTQAKAAGIRVITGSAVIEAKGAQRVSAARVAAIDVDTFTVTGKVET
LECDTIASSGGYSPVIHLASHTGARPVWSDDIIGFVPTTVAGVTATGGAHGVYPLGEVLA
DGVEAGVNAATALGFAATVNDADLPHVEQRHEGPACALFQVPHEKTTLRAPKQFVDLQND
VTAGAIEVATLEGFESIEHVKRYTAMGFGTDQGKLGNINGMAVAARCLGQSIPETGTTVF
RPNYTPVTFGAVVGRHCRELFDPERYTPMQAWHVAQGAEFEDVGQWKRPWYYPRKRADGG
LETMAEAVARECRAVREGVGILDASTLGKIDIQGPDAREFLGRIYTNKWQKLAPGRVRYG
LMCGDDGMVMDDGTTSCLAENHFLMTTTTGNAAPVLEWLELWHQTEWPELEVYFNSVTDH
WATMTVTGPEARKLLTDLTDIDLDREAFKFMDWREGHVAGVPARVFRISFTGELAFEINV
QAHYAMHVWEALFAHGDKYNLTPYGTETMHVLRAEKGFIIVGQDTDGSVTPEDLGMHWAI
GYDKPFPWVGKRALTRSDTRREGRKQLVGLKPKDASVVLEEGAPVVFDPKHAIPMPMAGH
VTSSYYSPTLESGFALAVVKGGHQRMGESVYLPMADGRVHEAEIVGTQFVDPKGERQHV
NT seq 3060 nt   +upstreamnt  +downstreamnt
atgagccagacagcatcacagtccaaccgcctggcgcaaggcggccaggtcgaccgcacg
cagacgttgacctttaccttcaatggccgcacatacaccggccatcccggcgatactctg
gcctcggccttgctggccaatggcgtggacctggtcaatcgcagcttcaagtactcgcgc
ccgcgcggcaccgtcgccgccggtgcggaagaacccaacgcggtggttcaattgggcgcc
acggaggcgacccaggtgcccaacgtgcgcgctacccagcaggcgctttacgacggcctg
gtcgcgagtagcaccaacggttggcccgacgcccagcgcgacatcatgcgctgggtcggc
aagctgggcagtccgttcatgccgccggggttctattacaagaccttcatggcaccggcc
tcgatgtggatgacctacgaaaaatacatccgcaagacggccggtctggggcgtagtccg
acacagcccgatccggatatctacgaccacatgcatcggcattgtgacctgctcgtcgtc
ggcgccggccctgcaggcttgagcgcggcgctggcggcggcgcgtgccggggcccgggta
atcctcgctgacgaacaagagacgatgggtggctcgctgctcgatacgcgcgagacgctg
gacgatcaacccgccgctcaatggctgaagacgacattggcggcgctggcggaacacgac
aacgtcaccttgctgccgcgtaccaccgcgcatgggtatcacgatcatcatttcgtgacg
cttcacgaacgccgcaccgagcacctgggcgatagtgcgccgtctcaggatggtcatcgc
caggcgcgctcgcggctgcaccgggtacgtgccggccaggtaatcctggcgaccggcgca
catgagcgcccgctggtgtatgccaacaacgatgtccccggcaacctgctggctggagcg
gtgtcgacctacattcgccgctacggcgtggtgcccggccagaagctggtgctctccacc
agcaacgatcacgcgtaccgcgccgcattggattggcaggaggccgggcgcgaggtggcg
gctatcgtcgatgcccgcaccgcgccggagggcgatctcgtaacgcaggccaaggcggcg
ggcatccgcgtcatcaccggcagtgcggtgatcgaggccaaaggggcgcagcgcgtctca
gcggcacgcgtggcggccatcgacgtggacaccttcacggtcaccggaaaagtcgagacg
ctcgagtgcgacaccatcgccagctccggcggctacagtccggtgatccacttggcctcg
cataccggcgcgcgtccggtatggagcgatgacatcatcggtttcgtaccgactaccgtg
gcgggcgtcacggcgacgggcggtgcccatggcgtctatccgctgggcgaggtgctggcg
gacggcgtcgaggccggcgttaacgcagcgacggcactgggcttcgctgccaccgtgaat
gacgcggacctgccacatgtcgagcagcgccatgaaggcccggcctgcgcgctattccag
gtgccgcatgagaaaaccacgctgcgtgcgcccaagcagttcgtcgatctgcagaatgac
gtcaccgccggcgccatcgaggtggcaacgctcgaagggttcgaatccatcgagcacgtc
aagcgctacaccgccatgggcttcggtaccgaccagggcaagctgggtaatatcaatggt
atggcggtcgccgcacgctgcctggggcagagcattcccgaaaccggcactacggtattc
aggcccaactacacaccagtgaccttcggtgccgtggtcggacgccactgccgcgagctc
ttcgatcccgagcgctacacgccgatgcaggcctggcacgttgctcagggcgccgaattc
gaagacgtcgggcagtggaagcgtccttggtactatcctcgcaagcgcgccgatggcgga
ctcgaaaccatggcggaagcggtggcccgtgagtgccgcgcggttcgcgagggtgtgggc
attctcgacgcctcgacgctgggcaagatcgatatccaggggccggatgctcgcgagttc
ctgggtcgtatctacaccaataagtggcagaagctggcgcctggtcgcgtgcgctacgga
ctgatgtgcggcgacgacggcatggtgatggacgacggcaccaccagctgcctggccgag
aatcacttcctcatgaccaccaccaccggcaacgccgcgccggtgctggaatggctcgaa
ctctggcaccagaccgaatggccagaactcgaggtgtatttcaactcggtcaccgaccac
tgggcgacgatgaccgtgaccggtcccgaggcgcgcaagctgctcaccgacttgaccgat
atcgacctcgaccgcgaggcgttcaagttcatggattggcgcgaggggcatgtggcgggt
gtacccgcgcgggtgttccgtatttccttcaccggggagctggccttcgagatcaacgtc
caggcgcactatgccatgcacgtctgggaagcgttattcgcgcacggcgacaagtacaac
ctgacgccttacggcactgagacgatgcatgtgttgcgtgccgagaagggcttcatcatc
gtcggccaggataccgatgggtcggtgacgcccgaggatctcggcatgcactgggccatc
ggctatgacaagccgttcccgtgggtcggcaagcgggcgctgacgcgctccgatacgcgt
cgcgaagggcgcaagcagctcgtcggcctcaaacccaaggacgcgagcgtggtgctggag
gaaggcgcgccggtcgtcttcgatccgaaacacgccatccccatgcccatggctggccac
gtgacctcgagctactacagcccgacgctggaaagcggctttgccctggcggtggtcaag
ggtggccatcagcgcatgggggagagcgtctatctgccgatggccgatgggcgtgtgcat
gaagccgaaatcgtcggtacccaattcgtcgatcccaagggagagcgccagcatgtctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (56)   

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