KEGG   Chromohalobacter salexigens: Csal_2969
Entry
Csal_2969         CDS       T00347                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
csa  Chromohalobacter salexigens
Pathway
csa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Csal_2969
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csa03400]
    Csal_2969
Enzymes [BR:csa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Csal_2969
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Csal_2969
DNA repair and recombination proteins [BR:csa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Csal_2969
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: ABE60314
UniProt: Q1QT94
Position
complement(3308866..3309711)
AA seq 281 aa
MPARTWRGACMPELPEVETTRRGIAPHVEGREIREIIVRQPRLRTPVPDDLADTLVGHRI
GELGRRAKYLLMPVGAGTLLWHLGMSGSLRLARLGDLPRKHDHVDLVLEGGAILRYHDPR
RFGFVDWLQGSPLDDPRLARLGPEPLSPDFDGERLYRLSRKRRVAVKPFLMDNAVVVGVG
NIYASEALFLAGIDPRRAAGRISRERYERLAEAARDVLAAAITQGGTTLRDFVSGTGEPG
YFAQRLNVYGRHDAPCRRCGELLRLVTLGQRASVFCPHCQR
NT seq 846 nt   +upstreamnt  +downstreamnt
atgccggcaagaacgtggcgaggtgcctgcatgcctgaacttcccgaagtcgagacgacg
cgccgaggcatcgcgccgcatgtcgaggggcgtgaaattcgtgagatcatcgtgcgccag
ccgcgcctgcgcacgccggtgccggacgatctggcggacaccctcgtcggccaccgcatc
ggtgaactcgggcggcgcgccaagtacctgctgatgccggtcggcgcaggcaccttgctg
tggcatctggggatgtccggcagtctgcgcctggcgcgcctcggcgatctgcccaggaag
cacgaccatgtcgatctggtgctggaaggcggtgcgatactacgctaccacgatccgcgc
cgtttcggattcgtggactggctgcaggggtctcccctcgacgatccacgcctggcgcgc
ctggggcccgagccgttgtcgcccgacttcgacggcgagcgtctctaccgcctgtcgcgc
aagcggcgcgttgccgtcaagccgtttctgatggataacgcggtggtggtgggagtcggc
aacatctacgcgagcgaagcgctgtttctcgcgggcatcgatccgcggcgcgcggccggg
cgtatctcgcgcgagcgctacgaacgtctggccgaggcggcgcgcgacgtgctggcggcg
gcgatcacccagggtggcacgaccttgcgcgacttcgtcagcggcaccggcgaacccggc
tacttcgctcagcgcctcaacgtctatggacggcacgatgccccctgtcggcgttgcggc
gagcttcttcgcctggtaacgctgggtcagcgtgccagcgtcttctgtcctcactgtcag
cgttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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