KEGG   Chlorocebus sabaeus (green monkey): 103214863
Entry
103214863         CDS       T04361                                 
Symbol
UPF3A
Name
(RefSeq) UPF3 regulator of nonsense transcripts homolog A (yeast)
  KO
K14328  regulator of nonsense transcripts 3
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03013  Nucleocytoplasmic transport
csab03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103214863 (UPF3A)
   03015 mRNA surveillance pathway
    103214863 (UPF3A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csab03019]
    103214863 (UPF3A)
Messenger RNA biogenesis [BR:csab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     103214863 (UPF3A)
   mRNA cycle factors
    P-body specific factors
     103214863 (UPF3A)
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 103214863
NCBI-ProteinID: XP_007959222
Ensembl: ENSCSAG00000017388
Position
3:92066229..92089868
AA seq 463 aa
MRSEKEGAGGPRAAVAARGPCGREKLSALEVQFHRDSPQREAETQPTSSSGCGGGAGKPR
EEKRTALSKVVIRRLPPGLTKEQLEEQLRPLPAHDYFEFFAADLSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFLDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKF
LETYCVEEEKTSANPETLLGEMEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERR
RRELEKKRLREEEKRRRREEERCKKKEADKQKKIAEKEVRIKLLKKPEKGEEPTAEKPKE
RGEEIDTGGGRPVEGSLEESQEMSRSGSDREYRDLERSQEKECEAQRHHVDDGRRHRAPH
EPDWLSRRSEDEQRWGKGPGQDRGKKGSQDSGAPGQAMERLGRAQRCDDGPAPRKERLAN
KDRPALQLYDPGARFRARECGGSGRICKAEGSGTGPEKREEAE
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgcgctcggaaaaggagggggccggaggccctagggcggcagttgccgcgcggggaccg
tgcgggagggaaaagctgtcggccctagaagtacagttccaccgcgactcgccgcagcgg
gaagctgagacgcagccaacctcgtcctccggttgcgggggcggtgcgggcaaacctcgc
gaggagaagaggacggccctgagtaaggtggtcatccgccgcctgcccccgggcctcacc
aaggagcagctggaggagcagctgcgcccgctgccagcgcacgactacttcgagttcttc
gccgccgacctgagtctttatcctcatctctactcaagagcatacattaattttaggaat
cctgatgacatccttctttttagagatcgttttgatggatatatcttccttgacagcaaa
ggcctagaatatcctgcagtggtagagtttgctccgttccagaagatagccaaaaagaag
ctgaaaaaaaaagatgccaagactggaagcatcgaagatgatccagaatataagaagttt
ttagaaacttactgtgtggaggaagagaagaccagcgccaaccctgagactctgctgggg
gagatggaggccaagacaagagagctcattgctagaagaacaacacctcttttggaatat
attaaaaacagaaaattagaaaagcagagaattcgagaagagaagcgagaagaacggagg
aggagagagttagaaaagaaacgtttgcgggaagaggaaaaaagaagaagaagagaagaa
gaaagatgcaaaaaaaaggaggcagataaacagaagaaaattgcagagaaagaagtaagg
attaagcttcttaaaaaaccagaaaagggagaggaaccaaccgcagagaaaccgaaagaa
agaggagaggagattgatactggaggtggcaggcccgtggaaggctcgctggaggagtcc
caggagatgtcacgcagcggcagtgatagagagtacagggatctggagagatctcaagaa
aaagaatgtgaagcacaaagacaccatgtggatgacggcaggaggcacagagctccccac
gagcctgactggctttccagaaggagtgaggatgagcagagatgggggaaaggacctggc
caagacagagggaagaaggggagccaggacagcggggctccggggcaggccatggagaga
ctgggaagagcgcagaggtgtgacgacggtccggcacccagaaaggagcgactggcaaac
aaggaccggccggccttgcagctgtatgatccaggagctcgcttccgagcacgagagtgt
ggcggaagtgggaggatctgcaaggcagaaggttcggggactggtcctgagaagagggaa
gaggcagagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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