KEGG   Chlorocebus sabaeus (green monkey): 103225228
Entry
103225228         CDS       T04361                                 
Symbol
SNRNP40
Name
(RefSeq) small nuclear ribonucleoprotein U5 subunit 40
  KO
K12857  Prp8 binding protein
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103225228 (SNRNP40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csab03041]
    103225228 (SNRNP40)
Spliceosome [BR:csab03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    103225228 (SNRNP40)
 Complex C
   U5 SnRNP specific factors
    103225228 (SNRNP40)
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 eIF2A Cytochrom_D1 WD40_like WDR54
Other DBs
NCBI-GeneID: 103225228
NCBI-ProteinID: XP_007977858
Ensembl: ENSCSAG00000001031
Position
20:101540827..101580298
AA seq 401 aa
MGILKTDWFFQAGSCGGRTKLEPIAWRLRGAARLVAALKRPVAAMIEQQKRKGPELPLVP
VKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHP
NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW
DSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQV
LAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD
NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS
RRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgggtatattgaaaaccgattggttcttccaagctggaagttgtggaggaaggactaag
ctggagccaattgcgtggcgcctgaggggcgcagcgcggttagtggcggcactgaagaga
ccggttgccgccatgatagaacaacagaagcgtaagggcccggagttgccgctggttcca
gtcaagcggcagcggcatgagttgctgctgggagcggggtcgggcccaggagccgggcag
cagcaggcgacgccgggagctttgctgcaagcgggacctccaaggtgttcctcccttcaa
gccccaatcatgctgctctctggacatgaaggggaagtatactgctgcaagttccacccc
aacggatccaccttagcatctgcaggatttgaccgactgatattgttgtggaatgtctat
ggtgactgtgataactatgccacactgaaaggacacagtggagcagtgatggaattgcat
tacaacacagatggcagtatgctcttctcagcatccacagataaaactgtggctgtgtgg
gatagtgaaacaggcgagagggttaaaaggctaaagggacatacctcctttgtgaattcc
tgttatccagccaggagaggccctcaacttgtctgcactggcagtgacgatggcacagtt
aagctttgggacatccggaagaaagcagccatccagacatttcagaacacgtaccaggtg
ttagctgtgaccttcaatgacacaagtgatcagattatttctggtggaatagacaatgat
atcaaggtctgggacctgcgccagaacaagctaacctacaccatgagaggccatgcagat
tcagtgactggcctgagtttaagttctgaaggctcttatcttttgtccaatgcaatggac
aatacagttcgtgtctgggatgtccggccatttgcccccaaagagaggtgtgtaaagata
tttcaaggaaatgtgcacaactttgaaaagaaccttctgagatgttcttggtcacctgat
ggaagcaaaatagcagctggctcagccgacaggtttgtgtatgtgtgggataccacaagc
aggagaatattatataagctgcccggccatgctggctccatcaatgaagttgctttccac
cctgacgagcccatcattatctcagcatcgagtgacaagagactgtatatgggagagatt
cagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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